Structure of PDB 5eix Chain B Binding Site BS01

Receptor Information
>5eix Chain B (length=701) Species: 573 (Klebsiella pneumoniae) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
GKLADCTAQDLNRTELFLVEGDSAGGSAKQARDREYQAIMPLKGKILNTW
EVSSDEVLASQEVHDISVAIGIDPDSDDLSQLRYGKICILADADSDGLHI
ATLLCALFVRHFRTLVKEGHVYVALPPLYRIDLGKEVYYALTEEEKTGVL
EQLKRKKGKPNVQRFKGLGEMNPMQLRETTLDPNTRRLVQLVISDEDEQQ
TTAIMDMLLAKKRSEDRRNWLQEKGMAERLALHEFTENAYLNYSMYVIMD
RALPFIGDGLKPVQRRIVYAMSELGLNASAKFKKSARTVGDVLGKYHPHG
DSACYEAMVLMAQPFSYRYPLGDGQGNWGAPKSFAAMRYTESRLSKYAEL
LLSELGQGTVDWVPNFDGTLQEPKMLPARLPNILLNGTTGIAVGMATDIP
PHNLREVAKAAITLIEQPKTTLDELLDIVQGPDFPTEAEIITSRAEIRKI
YQNGRGSVRMRAVWSKEDGAVVITALPHQVSGAKVLEQIAAQMRNKKLPM
VDDLRDESDHENPTRLVIVPRSNRVDMEQVMNHLFATTDLEKSYRINLNM
IGLDGRPAVKNLLEILSEWLVFRRDTVRRRLNHRLEKVLKRLHILEGLLV
AFLNIDEVIEIIRTEDEPKPALMSRFGISETQAEAILELKLRHLAKLEEM
KIRGEQSELEKERDQLQAILASERKMNNLLKKELQADADAFGDDRRSPLH
E
Ligand information
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB5eix Structure of a quinolone-stabilized cleavage complex of topoisomerase IV from Klebsiella pneumoniae and comparison with a related Streptococcus pneumoniae complex.
Resolution3.35 Å
Binding residue
(original residue number in PDB)		E419 G443 R1029 K1039 H1075 H1077 I1172
Binding residue
(residue number reindexed from 1)		E20 G44 R251 K261 H297 H299 I391
Gene Ontology
--> -->
 
 
UnboundLocalError		Python 3.6.8: /usr/bin/python3
Fri Nov 22 22:08:23 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1435     title=pdb2title(pdbid)
   1436     if bs.startswith("BS"):
=> 1437         pubmed,uniprot=display_interaction(pdbid,asym_id,bs,title)
   1438     else:
   1439         if lig3:
pubmed = '', uniprot = '', display_interaction = <function display_interaction>, pdbid = '5eix', asym_id = 'B', bs = 'BS01', title = 'Structure of a quinolone-stabilized cleavage com...with a related Streptococcus pneumoniae complex. '
 /var/www/html/BioLiP/pdb.cgi in display_interaction(pdbid='5eix', asym_id='B', bs='BS01', title='Structure of a quinolone-stabilized cleavage com...with a related Streptococcus pneumoniae complex. ')
   1295         display_ec(ec,csaOrig,csaRenu)
   1296     if go:
=> 1297         display_go(go,uniprot,pdbid,asym_id)
   1298     return pubmed,uniprot
   1299 
global display_go = <function display_go>, go = '0003677,0003918,0005524,0005694,0006259,0006265', uniprot = '', pdbid = '5eix', asym_id = 'B'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0003677,0003918,0005524,0005694,0006259,0006265', uniprot='', pdbid='5eix', asym_id='B')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>