Structure of PDB 5e6a Chain B Binding Site BS01
Receptor Information
>5e6a Chain B (length=73) Species:
9606
(Homo sapiens) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
PKLCLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDK
IRRKNCPACRYRKCLQAGMNLEA
Ligand information
>5e6a Chain C (length=16) [
Search DNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
ctgggaatttcctgat
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
5e6a
Cryptic glucocorticoid receptor-binding sites pervade genomic NF-kappa B response elements.
Resolution
2.197 Å
Binding residue
(original residue number in PDB)
S440 R447 R470 K471 R477
Binding residue
(residue number reindexed from 1)
S23 R30 R53 K54 R60
Binding affinity
PDBbind-CN
: Kd>50uM
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003700
DNA-binding transcription factor activity
GO:0008270
zinc ion binding
GO:0043565
sequence-specific DNA binding
Biological Process
GO:0006355
regulation of DNA-templated transcription
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:5e6a
,
PDBe:5e6a
,
PDBj:5e6a
PDBsum
5e6a
PubMed
29626214
UniProt
P04150
|GCR_HUMAN Glucocorticoid receptor (Gene Name=NR3C1)
[
Back to BioLiP
]