Structure of PDB 5dor Chain B Binding Site BS01

Receptor Information
>5dor Chain B (length=161) Species: 10679 (Peduovirus P2) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
TGYLTQEEIALLLAALDGDNKKIAILCLSTGARWGEAARLKAENIIHNRV
TFVKKPRTVPISEAVAKMIADGFLFPDADYPRFRRTMKAIKPDLPMGQAT
HALRHSFATHFMINGGSIITLQRILGHTRIEQTMVYAHFAPEYLQDAISL
NPLRGGTEAES
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain5dor Chain B Residue 402 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB5dor Crystal structure of the bacteriophage P2 integrase catalytic domain.
Resolution2.5 Å
Binding residue
(original residue number in PDB)		H269 H273
Binding residue
(residue number reindexed from 1)		H101 H105
Annotation score4
Enzymatic activity
Enzyme Commision number 2.7.7.-
3.1.-.-
Gene Ontology
Biological Process
GO:0006310 DNA recombination
GO:0015074 DNA integration

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Molecular Function
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Biological Process
External links
PDB RCSB:5dor, PDBe:5dor, PDBj:5dor
PDBsum5dor
PubMed26453836
UniProtP36932|VINT_BPP2 Integrase (Gene Name=int)

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