Structure of PDB 5din Chain B Binding Site BS01

Receptor Information
>5din Chain B (length=124) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
EFNPLCFECGQQHWTRENHLYNYQNEVDDDLVCHICLQPLLQPLDTPCGH
TFCYKCLRNFLQEKDFCPLDRKRLHFKLCKKSSILVHKLLDKLLVLCPFS
SVCKDVMQRCDLEAHLKNRCPGAS
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain5din Chain B Residue 201 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB5din Structural basis for the indispensable role of a unique zinc finger motif in LNX2 ubiquitination.
Resolution1.864 Å
Binding residue
(original residue number in PDB)
C95 C101 H113 C118
Binding residue
(residue number reindexed from 1)
C97 C103 H115 C120
Annotation score4
Enzymatic activity
Enzyme Commision number 6.3.2.19: Transferred entry: 2.3.2.23, 2.3.2.27 and 6.2.1.45.
External links
PDB RCSB:5din, PDBe:5din, PDBj:5din
PDBsum5din
PubMed26451611
UniProtQ8N448|LNX2_HUMAN Ligand of Numb protein X 2 (Gene Name=LNX2)

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