Structure of PDB 5cra Chain B Binding Site BS01

Receptor Information
>5cra Chain B (length=172) Species: 446 (Legionella pneumophila) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
PKYVEGVELTQEGMHAIFARMGYGDITSGSIYNGVPTIDTGALNRQGFMP
VLTGVGPHRDSGHWIMLIKGPGNQYYLFDPLGKTSGEGYQNILAAQLPMG
STLSVIPNGSGLNMGLCGYWVASAGLRAHQALNQHNPPTLLNVGQTITNE
MRNELDHDGYRKITGWLRAVAD
Ligand information
Ligand IDGVE
InChIInChI=1S/C5H11NO2/c1-8-5(7)3-2-4-6/h2-4,6H2,1H3
InChIKeyKVQGGLZHHFGHPU-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.370
OpenEye OEToolkits 1.7.0		COC(=O)CCCN
ACDLabs 12.01O=C(OC)CCCN
FormulaC5 H11 N O2
NameMETHYL 4-AMINOBUTANOATE
ChEMBL
DrugBank
ZINCZINC000002019854
PDB chain5cra Chain C Residue 101 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB5cra Structural basis of substrate recognition by a bacterial deubiquitinase important for dynamics of phagosome ubiquitination.
Resolution2.64 Å
Binding residue
(original residue number in PDB)		E9 G63 H64 N114 G116 C118
Binding residue
(residue number reindexed from 1)		E8 G62 H63 N113 G115 C117
Annotation score1
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Biological Process
GO:0016579 protein deubiquitination

View graph for
Biological Process
External links
PDB RCSB:5cra, PDBe:5cra, PDBj:5cra
PDBsum5cra
PubMed26598703
UniProtQ6RCR0

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