Structure of PDB 5cq9 Chain B Binding Site BS01

Receptor Information
>5cq9 Chain B (length=270) Species: 99287 (Salmonella enterica subsp. enterica serovar Typhimurium str. LT2) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
VWDRFKDCFRTHKKQEVLEVLYTLIHGCTGMEKIHAFTQLKEYANPSQQD
RFVMRFDMNQTQVLFEIDGKVIDKCNLHRLLNVSENCIFKVMEEDEEELF
LKICIKYGEKISRYPELLEGFANKLKDAVNEDDDVKDEVYKLMRSGEDRK
MECVEWNGTLTEEEKNKLRCLQMGSFNITTQFFKIGYWELEGEVLFDMVH
PTLSYLLQAYKPSLSLIETNTMLFSDVLNKDYDDYQNNKREIDAILRRIY
RSHNNTLFISEKSSCRNMLI
Ligand information
>5cq9 Chain D (length=11) Species: 90371 (Salmonella enterica subsp. enterica serovar Typhimurium) [Search peptide sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
AAAAAAAAAAA
Receptor-Ligand Complex Structure
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PDB5cq9 Salmonella Disrupts Host Endocytic Trafficking by SopD2-Mediated Inhibition of Rab7.
Resolution3.0 Å
Binding residue
(original residue number in PDB)		L53 L56 Y90
Binding residue
(residue number reindexed from 1)		L18 L21 Y43
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Biological Process
GO:0030254 protein secretion by the type III secretion system
Cellular Component
GO:0005576 extracellular region
GO:0016020 membrane
GO:0020002 host cell plasma membrane
GO:0033644 host cell membrane

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Biological Process
View graph for
Cellular Component
External links
PDB RCSB:5cq9, PDBe:5cq9, PDBj:5cq9
PDBsum5cq9
PubMed26299973
UniProtQ8ZQC8|SOPD2_SALTY Secreted effector protein sopD2 (Gene Name=sopD2)

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