Structure of PDB 5cho Chain B Binding Site BS01
Receptor Information
>5cho Chain B (length=163) Species:
77133
(uncultured bacterium) [
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LRDSRSLRGIFSSFATGVTVVTVGGDSPHAMTANSFTSVSLDPPLILVCV
ECDAAMHGSLLEVGSFGVSVLAADQQHVALLYANRWRPRDPTQFDRPGWA
RGARTGAPLARGALAWFECALWRAYDAGDHSIFVGRLLTAERHDRRDALV
YHSGQFRGLPDRA
Ligand information
Ligand ID
FAD
InChI
InChI=1S/C27H33N9O15P2/c1-10-3-12-13(4-11(10)2)35(24-18(32-12)25(42)34-27(43)33-24)5-14(37)19(39)15(38)6-48-52(44,45)51-53(46,47)49-7-16-20(40)21(41)26(50-16)36-9-31-17-22(28)29-8-30-23(17)36/h3-4,8-9,14-16,19-21,26,37-41H,5-7H2,1-2H3,(H,44,45)(H,46,47)(H2,28,29,30)(H,34,42,43)/t14-,15+,16+,19-,20+,21+,26+/m0/s1
InChIKey
VWWQXMAJTJZDQX-UYBVJOGSSA-N
SMILES
Software
SMILES
CACTVS 3.341
Cc1cc2N=C3C(=O)NC(=O)N=C3N(C[C@H](O)[C@H](O)[C@H](O)CO[P@](O)(=O)O[P@@](O)(=O)OC[C@H]4O[C@H]([C@H](O)[C@@H]4O)n5cnc6c(N)ncnc56)c2cc1C
OpenEye OEToolkits 1.5.0
Cc1cc2c(cc1C)N(C3=NC(=O)NC(=O)C3=N2)CC(C(C(COP(=O)(O)OP(=O)(O)OCC4C(C(C(O4)n5cnc6c5ncnc6N)O)O)O)O)O
OpenEye OEToolkits 1.5.0
Cc1cc2c(cc1C)N(C3=NC(=O)NC(=O)C3=N2)C[C@@H]([C@@H]([C@@H](CO[P@@](=O)(O)O[P@](=O)(O)OC[C@@H]4[C@H]([C@H]([C@@H](O4)n5cnc6c5ncnc6N)O)O)O)O)O
CACTVS 3.341
Cc1cc2N=C3C(=O)NC(=O)N=C3N(C[CH](O)[CH](O)[CH](O)CO[P](O)(=O)O[P](O)(=O)OC[CH]4O[CH]([CH](O)[CH]4O)n5cnc6c(N)ncnc56)c2cc1C
ACDLabs 10.04
O=C2C3=Nc1cc(c(cc1N(C3=NC(=O)N2)CC(O)C(O)C(O)COP(=O)(O)OP(=O)(O)OCC6OC(n5cnc4c(ncnc45)N)C(O)C6O)C)C
Formula
C27 H33 N9 O15 P2
Name
FLAVIN-ADENINE DINUCLEOTIDE
ChEMBL
CHEMBL1232653
DrugBank
DB03147
ZINC
ZINC000008215434
PDB chain
5cho Chain B Residue 201 [
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Receptor-Ligand Complex Structure
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PDB
5cho
Crystal Structure of BorF, the Flavin Reductase Component of a Bacterial Two-Component Tryptophan Halogenase
Resolution
2.37 Å
Binding residue
(original residue number in PDB)
H59 M61 T62 A63 N64 S65 C79 V80 E81 A84 A85 M86 A113 R115 R117 R119 Y181
Binding residue
(residue number reindexed from 1)
H29 M31 T32 A33 N34 S35 C49 V50 E51 A54 A55 M56 A83 R85 R87 R89 Y151
Annotation score
2
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0000166
nucleotide binding
GO:0010181
FMN binding
GO:0016646
oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor
GO:0042602
riboflavin reductase (NADPH) activity
View graph for
Molecular Function
External links
PDB
RCSB:5cho
,
PDBe:5cho
,
PDBj:5cho
PDBsum
5cho
PubMed
UniProt
M9QXS1
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