Structure of PDB 5cge Chain B Binding Site BS01
Receptor Information
>5cge Chain B (length=262) Species:
282458
(Staphylococcus aureus subsp. aureus MRSA252) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
MNYLNNIRIENPLTICYTNDVVKNFTANGLLSIGASPAMSEAPEEAEEFY
KVAQALLINIGTLTAQNEQDIIAIAQTANEAGLPIVFDPVAVGASTYRKQ
FCKLLLKSAKVSVIKGNASEILALIDDTATMKGTDSDANLDAVTIAKKAY
AIYKTAIVITGKEDVIVQGDKAIVLANGSPLLARVTGAGCLLGGIIAGFL
FRETEPDIEALIEAVSVFNIAAEVAAENENCGGPGTFSPLLLDTLYHLNE
TTYQQRIRIQEV
Ligand information
Ligand ID
51F
InChI
InChI=1S/C6H10N2O/c1-6-7-2-3-8(6)4-5-9/h2-3,9H,4-5H2,1H3
InChIKey
JJWKKSUCSNDHNJ-UHFFFAOYSA-N
SMILES
Software
SMILES
CACTVS 3.385
OpenEye OEToolkits 1.9.2
Cc1nccn1CCO
ACDLabs 12.01
OCCn1c(ncc1)C
Formula
C6 H10 N2 O
Name
2-(2-methyl-1H-imidazol-1-yl)ethanol
ChEMBL
DrugBank
ZINC
ZINC000005836878
PDB chain
5cge Chain C Residue 301 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
5cge
Structure of ThiM from Vitamin B1 biosynthetic pathway of Staphylococcus aureus - Insights into a novel pro-drug approach addressing MRSA infections.
Resolution
1.62 Å
Binding residue
(original residue number in PDB)
N19 T186 C190
Binding residue
(residue number reindexed from 1)
N19 T186 C190
Annotation score
1
Enzymatic activity
Enzyme Commision number
2.7.1.50
: hydroxyethylthiazole kinase.
Gene Ontology
Molecular Function
GO:0000287
magnesium ion binding
GO:0004417
hydroxyethylthiazole kinase activity
GO:0005524
ATP binding
GO:0016301
kinase activity
GO:0046872
metal ion binding
Biological Process
GO:0009228
thiamine biosynthetic process
GO:0009229
thiamine diphosphate biosynthetic process
GO:0016310
phosphorylation
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:5cge
,
PDBe:5cge
,
PDBj:5cge
PDBsum
5cge
PubMed
26960569
UniProt
Q6GEY3
|THIM_STAAR Hydroxyethylthiazole kinase (Gene Name=thiM)
[
Back to BioLiP
]