Structure of PDB 5aum Chain B Binding Site BS01
Receptor Information
>5aum Chain B (length=216) Species:
10114
(Rattus) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
DVVLTQAPPTLSATIGQSVSISCRSSQSLLHRNGNTYLNWLLQRPGQPPQ
LLIYLVSRLESGVPNRFSGSGSGTAFTLKISGLEAEDLGVYYCVQGTHAP
LTFGSGTKLEIKRADAAPTVSIFPPSTEQLATGGASVVCLMNNFYPRDIS
VKWKIDGTERRDGVLDSVTDQDSKDSTYSMSSTLSLTKADYESHNLYTCE
VVHKTSSSPVVKSFNR
Ligand information
>5aum Chain D (length=11) Species:
39729
(Potyviridae) [
Search peptide sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
RENLYFQGKDG
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
5aum
Crystal structure of a Fab fragment with the ligand peptide
Resolution
2.05 Å
Binding residue
(original residue number in PDB)
H30A Y32 Y49 E55 G91 T92
Binding residue
(residue number reindexed from 1)
H31 Y37 Y54 E60 G96 T97
External links
PDB
RCSB:5aum
,
PDBe:5aum
,
PDBj:5aum
PDBsum
5aum
PubMed
[
Back to BioLiP
]
