Structure of PDB 5a8k Chain B Binding Site BS01
Receptor Information
>5a8k Chain B (length=442) Species:
145261
(Methanothermobacter wolfeii) [
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AKFEDKVDLYDDRGNLVEEQVPLEALSPLRNPAIKSIVQGIKRTVAVNLE
GIENALKTAKVGGPACKIMGRELDLDIVGNAESIAAAAKEMIQVTEDDDT
KVELLGGGKRALVQVPSARFDVAAEYSAAPLVTATAFVQAIINEFDVSMY
DANMVKAAVLGRYPQSVEYMGANIATMLDIPQKLEGPGYALRNIMVNHVV
ATTLKNTLQAAALSTILEQTAMFEMGDAVGAFERMHLLGLAYQGMNADNL
VFDLVKANGKEGTVGSVIADLVERALEDGVIKVEKELTDYKVYGTDDLAM
WNAYAAAGLMAATMVNQGAARAAQGVSSTLLYYNDLIEFETGLPSVDFGK
VEGTAVGFSFFSHSIYGGGGPGIFNGNHIVTRHSKGFAIPCVAAAMALDA
GTQMFSPEATSGLIKEVFSQVDEFREPLKYVVEAAAEIKNEI
Ligand information
Ligand ID
COM
InChI
InChI=1S/C2H6O3S2/c3-7(4,5)2-1-6/h6H,1-2H2,(H,3,4,5)
InChIKey
ZNEWHQLOPFWXOF-UHFFFAOYSA-N
SMILES
Software
SMILES
CACTVS 3.341
O[S](=O)(=O)CCS
OpenEye OEToolkits 1.5.0
C(CS(=O)(=O)O)S
ACDLabs 10.04
O=S(=O)(O)CCS
Formula
C2 H6 O3 S2
Name
1-THIOETHANESULFONIC ACID
ChEMBL
CHEMBL1098319
DrugBank
DB09110
ZINC
ZINC000003831040
PDB chain
5a8k Chain A Residue 556 [
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Receptor-Ligand Complex Structure
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PDB
5a8k
Didehydroaspartate Modification in Methyl-Coenzyme M Reductase Catalyzing Methane Formation.
Resolution
1.41 Å
Binding residue
(original residue number in PDB)
F361 Y367
Binding residue
(residue number reindexed from 1)
F360 Y366
Annotation score
2
Enzymatic activity
Enzyme Commision number
2.8.4.1
: coenzyme-B sulfoethylthiotransferase.
Gene Ontology
Molecular Function
GO:0016740
transferase activity
GO:0046872
metal ion binding
GO:0050524
coenzyme-B sulfoethylthiotransferase activity
Biological Process
GO:0015948
methanogenesis
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Molecular Function
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Biological Process
External links
PDB
RCSB:5a8k
,
PDBe:5a8k
,
PDBj:5a8k
PDBsum
5a8k
PubMed
27467699
UniProt
A0A1C7D1E2
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