Structure of PDB 4zoh Chain B Binding Site BS01
Receptor Information
>4zoh Chain B (length=274) Species:
273063
(Sulfurisphaera tokodaii str. 7) [
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MYPPKFGYVIPDNLNEALEFLEEHQDARPLAGGHSLIPMLKLRLIRPSYI
VEIRRFSNLSYITKDGNLYKIGALTTHYNISKSSIPLLSETASNIGDPQV
RNMGTIGGSISHLDPSADYPAALIAMDAKVKITSRKGDRVVNFKSFAKDM
FTPDLNPGELVTEIQVPTFEGYKFSYQKLERRAGDFAIVGVALLLKLSGD
VIEDVRIGLTAVNNVAVRAKGAEEELLGKRLNDEIIEKAATRAMESANPT
SGSAEYKKKMVKVLTKRAIITALK
Ligand information
Ligand ID
FAD
InChI
InChI=1S/C27H33N9O15P2/c1-10-3-12-13(4-11(10)2)35(24-18(32-12)25(42)34-27(43)33-24)5-14(37)19(39)15(38)6-48-52(44,45)51-53(46,47)49-7-16-20(40)21(41)26(50-16)36-9-31-17-22(28)29-8-30-23(17)36/h3-4,8-9,14-16,19-21,26,37-41H,5-7H2,1-2H3,(H,44,45)(H,46,47)(H2,28,29,30)(H,34,42,43)/t14-,15+,16+,19-,20+,21+,26+/m0/s1
InChIKey
VWWQXMAJTJZDQX-UYBVJOGSSA-N
SMILES
Software
SMILES
CACTVS 3.341
Cc1cc2N=C3C(=O)NC(=O)N=C3N(C[C@H](O)[C@H](O)[C@H](O)CO[P@](O)(=O)O[P@@](O)(=O)OC[C@H]4O[C@H]([C@H](O)[C@@H]4O)n5cnc6c(N)ncnc56)c2cc1C
OpenEye OEToolkits 1.5.0
Cc1cc2c(cc1C)N(C3=NC(=O)NC(=O)C3=N2)CC(C(C(COP(=O)(O)OP(=O)(O)OCC4C(C(C(O4)n5cnc6c5ncnc6N)O)O)O)O)O
OpenEye OEToolkits 1.5.0
Cc1cc2c(cc1C)N(C3=NC(=O)NC(=O)C3=N2)C[C@@H]([C@@H]([C@@H](CO[P@@](=O)(O)O[P@](=O)(O)OC[C@@H]4[C@H]([C@H]([C@@H](O4)n5cnc6c5ncnc6N)O)O)O)O)O
CACTVS 3.341
Cc1cc2N=C3C(=O)NC(=O)N=C3N(C[CH](O)[CH](O)[CH](O)CO[P](O)(=O)O[P](O)(=O)OC[CH]4O[CH]([CH](O)[CH]4O)n5cnc6c(N)ncnc56)c2cc1C
ACDLabs 10.04
O=C2C3=Nc1cc(c(cc1N(C3=NC(=O)N2)CC(O)C(O)C(O)COP(=O)(O)OP(=O)(O)OCC6OC(n5cnc4c(ncnc45)N)C(O)C6O)C)C
Formula
C27 H33 N9 O15 P2
Name
FLAVIN-ADENINE DINUCLEOTIDE
ChEMBL
CHEMBL1232653
DrugBank
DB03147
ZINC
ZINC000008215434
PDB chain
4zoh Chain B Residue 301 [
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Receptor-Ligand Complex Structure
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PDB
4zoh
Archaeal Mo-Containing Glyceraldehyde Oxidoreductase Isozymes Exhibit Diverse Substrate Specificities through Unique Subunit Assemblies.
Resolution
2.2 Å
Binding residue
(original residue number in PDB)
R28 P29 A31 G32 G33 H34 S35 L36 H77 I95 G96 V100 T105 G108 S109 S111 A117 D118 L160 V161 D185 F186
Binding residue
(residue number reindexed from 1)
R28 P29 A31 G32 G33 H34 S35 L36 H77 I95 G96 V100 T105 G108 S109 S111 A117 D118 L160 V161 D185 F186
Annotation score
4
Enzymatic activity
Catalytic site (original residue number in PDB)
Y259
Catalytic site (residue number reindexed from 1)
Y256
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0000166
nucleotide binding
GO:0016491
oxidoreductase activity
GO:0050660
flavin adenine dinucleotide binding
GO:0071949
FAD binding
View graph for
Molecular Function
External links
PDB
RCSB:4zoh
,
PDBe:4zoh
,
PDBj:4zoh
PDBsum
4zoh
PubMed
26808202
UniProt
Q974U9
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