Structure of PDB 4zg6 Chain B Binding Site BS01

Receptor Information
>4zg6 Chain B (length=756) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
GSCKGRCFELCRCDNLCKSYTSCCHDFDELCLKTARGWECTKDRCGEVRN
EENACHCSEDCLARGDCCTNYQVVCKGESHWVDDDCEEIKAAECPAGFVR
PPLIIFSVDGFRASYMKKGSKVMPNIEKLRSCGTHSPYMRPVYPTKTFPN
LYTLATGLYPESHGIVGNSMYDPVFDATFHLRGREKFNHRWWGGQPLWIT
ATKQGVKAGTFFWSVVIPHERRILTILQWLTLPDHERPSVYAFYSEQPDF
SGHKYGPFGPEMTNPLREIDKIVGQLMDGLKQLKLHRCVNVIFVGDHGME
DVTCDRTEFLSNYLTNVDDITLVPGTLGRIRSKFSNNAKYDPKAIIAALT
CKKPDQHFKPYLKQHLPKRLHYANNRRIEDIHLLVERRWHVARKPFFQGD
HGFDNKVNSMQTVFVGYGSTFKYKTKVPPFENIELYNVMCDLLGLKPAPN
NGTHGSLNHLLRTNTFRPTMPEEVTRPNYPGIMYLQSDFDLGCSTEERHL
LYGRPAVLYRTRYDILYHTDFESGYSEIFLMPLWTSYTVSKQAEVSSCVR
PDVRVSPSFSQNCLAYKNDKQMSYGFLFPPYLSSSPEAKYDAFLVTNMVP
MYPAFKRVWNYFQRVLVKKYASERNGVNVISGPIFDYDYDGLHDTEDKIK
QYVEGSSIPVPTHYYSIITSCLDFTQPADKCDGPLSVSSFILPHRPDNEE
SCNSSEDESKWVEELMKMHTARVRDIEHLTSLDFFRKTSRSYPEILTLKT
YLHTYE
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain4zg6 Chain B Residue 904 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB4zg6 Structural Basis for Inhibition of Human Autotaxin by Four Potent Compounds with Distinct Modes of Binding.
Resolution1.8 Å
Binding residue
(original residue number in PDB)
D172 T210 D359 H360
Binding residue
(residue number reindexed from 1)
D109 T147 D296 H297
Annotation score1
Enzymatic activity
Enzyme Commision number 3.1.4.39: alkylglycerophosphoethanolamine phosphodiesterase.
Gene Ontology
Molecular Function
GO:0003676 nucleic acid binding
GO:0005044 scavenger receptor activity
GO:0016787 hydrolase activity
GO:0030247 polysaccharide binding
GO:0046872 metal ion binding
Biological Process
GO:0006955 immune response

View graph for
Molecular Function

View graph for
Biological Process
External links
PDB RCSB:4zg6, PDBe:4zg6, PDBj:4zg6
PDBsum4zg6
PubMed26371182
UniProtQ13822|ENPP2_HUMAN Autotaxin (Gene Name=ENPP2)

[Back to BioLiP]