Structure of PDB 4wh8 Chain B Binding Site BS01

Receptor Information
>4wh8 Chain B (length=198) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
HMASMKKKGSVVIVGRINLSGDTAYAQQTRGEEGCQETSQTGRDKNQVEG
EVQIVSTATQTFLATSINGVLWTVYHGAGTRTIASPKGPVTQMYTNVDKD
LVGWQAPQGSRSLTPCTCGSSDLYLVTRHADVIPVRRRGDSRGSLLSPRP
ISYLKGSAGGPLLCPAGHAVGIFRAAVCTRGVAKAVDFIPVESLETTM
Ligand information
Ligand ID3M7
InChIInChI=1S/C36H46ClN5O9S/c1-35(2,3)51-34(46)39-27-11-9-7-5-6-8-10-21-18-36(21,33(45)41-52(47,48)24-13-14-24)40-30(43)28-17-23(20-42(28)32(27)44)50-31-26-16-22(37)12-15-25(26)29(49-4)19-38-31/h8,10,12,15-16,19,21,23-24,27-28H,5-7,9,11,13-14,17-18,20H2,1-4H3,(H,39,46)(H,40,43)(H,41,45)/b10-8-/t21-,23-,27+,28+,36-/m1/s1
InChIKeyZFAXEHOMXOFIQU-HGSGLVRESA-N
SMILES
SoftwareSMILES
CACTVS 3.385COc1cnc(O[C@@H]2C[C@@H]3N(C2)C(=O)[C@H](CCCCC\C=C/[C@@H]4C[C@]4(NC3=O)C(=O)N[S](=O)(=O)C5CC5)NC(=O)OC(C)(C)C)c6cc(Cl)ccc16
ACDLabs 12.01O=S(=O)(NC(=O)C12NC(=O)C3CC(Oc4ncc(OC)c5ccc(Cl)cc54)CN3C(=O)C(NC(=O)OC(C)(C)C)CCCCCC=CC2C1)C1CC1
CACTVS 3.385COc1cnc(O[CH]2C[CH]3N(C2)C(=O)[CH](CCCCCC=C[CH]4C[C]4(NC3=O)C(=O)N[S](=O)(=O)C5CC5)NC(=O)OC(C)(C)C)c6cc(Cl)ccc16
OpenEye OEToolkits 2.0.7CC(C)(C)OC(=O)N[C@H]1CCCCC/C=C\[C@@H]2C[C@]2(NC(=O)[C@@H]3C[C@H](CN3C1=O)Oc4c5cc(ccc5c(cn4)OC)Cl)C(=O)NS(=O)(=O)C6CC6
OpenEye OEToolkits 2.0.7CC(C)(C)OC(=O)NC1CCCCCC=CC2CC2(NC(=O)C3CC(CN3C1=O)Oc4c5cc(ccc5c(cn4)OC)Cl)C(=O)NS(=O)(=O)C6CC6
FormulaC36 H46 Cl N5 O9 S
Nametert-butyl {(2R,4S,6S,12Z,13aS,14aR,16aS)-2-[(7-chloro-4-methoxyisoquinolin-1-yl)oxy]-14a-[(cyclopropanesulfonyl)carbamoyl]-5,16-dioxo-1,2,3,5,6,7,8,9,10,11,13a,14,14a,15,16,16a-hexadecahydrocyclopropa[e]pyrrolo[1,2-a][1,4]diazacyclopentadecin-6-yl}carbamate
ChEMBLCHEMBL4789745
DrugBank
ZINCZINC000150531151
PDB chain4wh8 Chain B Residue 1201 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB4wh8 Structural Analysis of Asunaprevir Resistance in HCV NS3/4A Protease.
Resolution2.703 Å
Binding residue
(original residue number in PDB)
Q1041 F1043 H1057 V1078 D1081 L1135 K1136 G1137 A1139 F1154 R1155 A1156 A1157
Binding residue
(residue number reindexed from 1)
Q60 F62 H76 V97 D100 L154 K155 G156 A158 F173 R174 A175 A176
Annotation score1
Enzymatic activity
Catalytic site (original residue number in PDB) H1057 D1081 G1137 A1139
Catalytic site (residue number reindexed from 1) H76 D100 G156 A158
Enzyme Commision number 3.4.21.98: hepacivirin.
3.6.1.15: nucleoside-triphosphate phosphatase.
3.6.4.13: RNA helicase.
Gene Ontology
Molecular Function
GO:0008236 serine-type peptidase activity
Biological Process
GO:0006508 proteolysis
GO:0019087 transformation of host cell by virus

View graph for
Molecular Function

View graph for
Biological Process
External links
PDB RCSB:4wh8, PDBe:4wh8, PDBj:4wh8
PDBsum4wh8
PubMed25243902
UniProtA8DG50

[Back to BioLiP]