Structure of PDB 4rvp Chain B Binding Site BS01

Receptor Information
>4rvp Chain B (length=153) Species: 439688 (Sedum alfredii) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
KKKAVAVLKGNSAVEGVVTLTQEEDGPTTVNVRITGLTPGPHGFHLHEFG
DTTNGCISTGPHFNPKGLTHGAPEDEIRHAGDLGNIVANADGVAEVTIVD
NQIPLTGPNAVVGRAFVVHELEDDLGKGGHELSLSTGNAGGRLACGVIGL
TPT
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain4rvp Chain B Residue 201 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB4rvp The positive effects of Cd and Cd-Zn relationship in the Zn-related physiological processes involved in growth in the Zn/Cd hyperaccumulator Sedum alfredii
Resolution2.6 Å
Binding residue
(original residue number in PDB)
H75 H83 H92 D95
Binding residue
(residue number reindexed from 1)
H62 H70 H79 D82
Annotation score1
Enzymatic activity
Catalytic site (original residue number in PDB) H58 H60 H75 H83 H92 D95 H132 R155
Catalytic site (residue number reindexed from 1) H45 H47 H62 H70 H79 D82 H119 R142
Enzyme Commision number 1.15.1.1: superoxide dismutase.
Gene Ontology
Molecular Function
GO:0005507 copper ion binding
GO:0046872 metal ion binding
Biological Process
GO:0006801 superoxide metabolic process

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Molecular Function

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Biological Process
External links
PDB RCSB:4rvp, PDBe:4rvp, PDBj:4rvp
PDBsum4rvp
PubMed
UniProtA0A0A0QA66

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