Structure of PDB 4rlz Chain B Binding Site BS01
Receptor Information
>4rlz Chain B (length=307) Species:
286545
(Norovirus NLV/IF1998/2003/Iraq) [
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KTKPFTLPILTIGELTNSRFPAPIDQLYTSPNADVVVQPQNGRCSLDGEL
QGTTQLLTTAICSYRGMTSNPTRDYWDGHLLHLVHPNGATYDPTEDVPAP
FGTQDFRGILYGVLTQNPRASGDEAANSQGVYISSTSEKFTPKLGTIGLH
QVQGNIASNQQSKFTPVGIAVNGNTPFRQWELPNYSGALTLNTNLAPAVG
PNFPGEQILFFRSNVPSVQGGQPIEIDCLIPQEWVSHFYQESAPSQSDVA
LVRYVNPDTGRTIFEAKLHRQGFITIAATGSNPVVVPPNGYFRFDSWVNQ
FYALAPM
Ligand information
Ligand ID
GOL
InChI
InChI=1S/C3H8O3/c4-1-3(6)2-5/h3-6H,1-2H2
InChIKey
PEDCQBHIVMGVHV-UHFFFAOYSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.7.0
C(C(CO)O)O
ACDLabs 12.01
CACTVS 3.370
OCC(O)CO
Formula
C3 H8 O3
Name
GLYCEROL;
GLYCERIN;
PROPANE-1,2,3-TRIOL
ChEMBL
CHEMBL692
DrugBank
DB09462
ZINC
ZINC000000895048
PDB chain
4rlz Chain B Residue 601 [
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Receptor-Ligand Complex Structure
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PDB
4rlz
A Unique Human Norovirus Lineage with a Distinct HBGA Binding Interface.
Resolution
1.19 Å
Binding residue
(original residue number in PDB)
W296 T356 S357 N392 N394 T395
Binding residue
(residue number reindexed from 1)
W76 T136 S137 N172 N174 T175
Annotation score
1
Enzymatic activity
Enzyme Commision number
?
External links
PDB
RCSB:4rlz
,
PDBe:4rlz
,
PDBj:4rlz
PDBsum
4rlz
PubMed
26147716
UniProt
Q6B7R3
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