Structure of PDB 4pca Chain B Binding Site BS01

Receptor Information
>4pca Chain B (length=218) Species: 1217107 (Anaplasma phagocytophilum str. HGE1) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
HMRNVSLSKQDEYLNKLFAVDTEGALKAHKTAPSELRMAQLGTVEGQMLQ
LLIRMAGIHSIVEVGTCVGFSAICMAHALPSKGHIYTIEKDYENVVTANQ
NIVNCKLEDKITVLHGEALAQLNTLKEMAPFDMIFIDANKSSYLAYLNWA
KMYIRKGGLIVADNTFLFGSVFDEHPTEKSSNAHASMRAFNDELANKEKY
LSTIIPTSEGMMVSIKLT
Ligand information
Ligand IDMN
InChIInChI=1S/Mn/q+2
InChIKeyWAEMQWOKJMHJLA-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Mn+2]
CACTVS 3.341[Mn++]
FormulaMn
NameMANGANESE (II) ION
ChEMBL
DrugBankDB06757
ZINC
PDB chain4pca Chain B Residue 301 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB4pca An O-Methyltransferase Is Required for Infection of Tick Cells by Anaplasma phagocytophilum.
Resolution1.5 Å
Binding residue
(original residue number in PDB)
D136 D162 N163
Binding residue
(residue number reindexed from 1)
D137 D163 N164
Annotation score4
Gene Ontology
--> -->
 
 
UnboundLocalError
Python 3.6.8: /usr/bin/python3
Sun Nov 24 21:58:30 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1435     title=pdb2title(pdbid)
   1436     if bs.startswith("BS"):
=> 1437         pubmed,uniprot=display_interaction(pdbid,asym_id,bs,title)
   1438     else:
   1439         if lig3:
pubmed = '', uniprot = '', display_interaction = <function display_interaction>, pdbid = '4pca', asym_id = 'B', bs = 'BS01', title = 'An O-Methyltransferase Is Required for Infection of Tick Cells by Anaplasma phagocytophilum.'
 /var/www/html/BioLiP/pdb.cgi in display_interaction(pdbid='4pca', asym_id='B', bs='BS01', title='An O-Methyltransferase Is Required for Infection of Tick Cells by Anaplasma phagocytophilum.')
   1295         display_ec(ec,csaOrig,csaRenu)
   1296     if go:
=> 1297         display_go(go,uniprot,pdbid,asym_id)
   1298     return pubmed,uniprot
   1299 
global display_go = <function display_go>, go = '0008171', uniprot = '', pdbid = '4pca', asym_id = 'B'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0008171', uniprot='', pdbid='4pca', asym_id='B')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>