Structure of PDB 4ncb Chain B Binding Site BS01 |
| >4ncb Chain B (length=672) Species: 274 (Thermus thermophilus)
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GKTEVFLNRFALRPLNPEELRPWRLEVVLDPPPGREEVYPLLAQVARRAG
GVTVRMGDGLASWSPPEVLVLEGTLARMGQTYAYRLYPKGRRPLDPKDPG
ERSVLSALARRLLQERLRRLEGVWVEGLAVYRREHARGPGWRVLGGAVLD
LWVSDSGAFLLEVDPAYRILCEMSLEAWLAQGHPLPKRVRNAYDRRTWEL
LRLGEEDPKELPLPGGLSLLDYHASKGRLQGREGGRVAWVADPIPHLTGL
LVPVLTLEDLHESLALSLPWEERRRRTREIASWIGRRLGLGTPEAVRAQA
YRLSIPKLMGRRAVSKPADALRVGFYRAQETALALLRLDGAQGWPEFLRR
ALLRAFGASGASLRLHTLHAHPSQGLAFREALRKAKEEGVQAVLVLTPPM
AWEDRNRLKALLLREGLPSQILNVPLREEERHRWENALLGLLAKAGLQVV
ALSGAYPAELAVGFDAGGRESFRFGGAACAVGGDGGHLLWTLPEAQAGER
IPQEVVWDLLEETLWAFRRKAGRLPSRVLLLRDGRVPQDEFALALEALAR
EGIAYDLVSVRKSGGGRVYPVQGRLADGLYVPLEDKTFLLLTVHRDFRGT
PRPLKLVHEAGDTPLEALAHQIFHLTRLYPASGFAFPRLPAPLHLADRLV
KEVGRLGIRHLKEVDREKLFFV |
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| PDB | 4ncb Structure-based cleavage mechanism of Thermus thermophilus Argonaute DNA guide strand-mediated DNA target cleavage. |
| Resolution | 2.189 Å |
Binding residue
(original residue number in PDB) | Y43 R59 A170 Y171 R172 I173 R192 T201 L265 L267 L279 S280 L281 R286 P412 M413 W415 K422 Q433 I434 N436 R446 N449 K457 E512 R513 R580 R611 T613 P614 R615 Y642 A644 S645 P650 R651 H657 R661 V685 |
Binding residue
(residue number reindexed from 1) | Y39 R55 A166 Y167 R168 I169 R188 T197 L255 L257 L266 S267 L268 R273 P399 M400 W402 K409 Q420 I421 N423 R433 N436 K444 E499 R500 R567 R598 T600 P601 R602 Y629 A631 S632 P637 R638 H644 R648 V672 |
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