Structure of PDB 4m59 Chain B Binding Site BS01

Receptor Information
>4m59 Chain B (length=683) Species: 4577 (Zea mays) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
LSPDAQVLVLAISSHPLPTLAAFLASRRDELLRADITSLLKALELSGHWE
WALALLRWAGKEGAADASALEMVVRALGREGQHDAVCALLDETPLPPGSR
LDVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTLVTYNVVLDVYGR
MGRSWPRIVALLDEMRAAGVEPDGFTASTVIAACSRDGLVDEAVAFFEDL
KARGHAPSVVTYNALLQVFGKAEALRVLGEMEQNGPDAVTYNELAGTYAR
AGFFEEAARCLDTMAFTYNTVMTAYGNVGKVDEALALFDQMKKTGFVPNV
NTYNLVLGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTWNTMLAVSGKRGM
EDYVTRVLEGMRSSGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAG
FTPCITTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNEQSYSLLLQCY
AKGGNVAGIAAIENEVYVFPSWVILRTLVIANFKCRRLDGMETAFQEVKA
RGYNPDLVIFNSMLSIYAKNGMYSKATEVFDSIKRSGLSPDLITYNSLMD
MYAKCSESWEAEKILNQLKCSQTMKPDVVSYNTVINGFCKQGLVKEAQRV
LSEMVADGMAPCAVTYHTLVGGYSSLEMFSEAREVIGYMVQHGLKPMELT
YRRVVESYCRAKRFEEARGFLKALEAYIEDAQF
Ligand information
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB4m59 Structural basis for the modular recognition of single-stranded RNA by PPR proteins.
Resolution2.46 Å
Binding residue
(original residue number in PDB)		E151 R175 H182 V210 N213 V214 F246 S249 T250 V281 N284 A285
Binding residue
(residue number reindexed from 1)		E80 R104 H111 V139 N142 V143 F175 S178 T179 V210 N213 A214
Binding affinityPDBbind-CN: Kd=102nM
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003729 mRNA binding
GO:0042802 identical protein binding
Biological Process
GO:0006397 mRNA processing
GO:0048255 mRNA stabilization
Cellular Component
GO:0009507 chloroplast
GO:0009570 chloroplast stroma

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:4m59, PDBe:4m59, PDBj:4m59
PDBsum4m59
PubMed24162847
UniProtB8Y6I0|PPR10_MAIZE Pentatricopeptide repeat-containing protein 10, chloroplastic (Gene Name=PPR10)

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