Structure of PDB 4jws Chain B Binding Site BS01
Receptor Information
>4jws Chain B (length=395) Species:
303
(Pseudomonas putida) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
NLAPLPPHVPEHLVFDFDMYNPSNLSAGVQEAWAVLQESNVPDLVWTRSN
GGHWIATRGQLIREAYEDYRHFSSESPFIPRESMDPPEQRQFRALANQVV
GMPVVDKLENRIQELASSLIESLRPQGQCNFTEDYAEPFPIRIFMLLAGL
PEEDIPHLKYLTDQMTRPDGSMTFAEAKEALYDYLIPIIEQRRQKPGTDA
ISIVANGQVNGRPITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPE
HRQELIERPERIPAASEELLRRFSLVADGRILTSDYEFHGVQLKKGDQIL
LPQMLSGLDERENAAPMHVDFSRQCVSHTTFGHGSHLCLGQHLARREIIV
TLKEWLTRIPDFSIAPGAQIQHKSGIVSGVQALPLVWDPATTKAV
Ligand information
Ligand ID
HEM
InChI
InChI=1S/C34H34N4O4.Fe/c1-7-21-17(3)25-13-26-19(5)23(9-11-33(39)40)31(37-26)16-32-24(10-12-34(41)42)20(6)28(38-32)15-30-22(8-2)18(4)27(36-30)14-29(21)35-25;/h7-8,13-16H,1-2,9-12H2,3-6H3,(H4,35,36,37,38,39,40,41,42);/q;+2/p-2/b25-13-,26-13-,27-14-,28-15-,29-14-,30-15-,31-16-,32-16-;
InChIKey
KABFMIBPWCXCRK-RGGAHWMASA-L
SMILES
Software
SMILES
OpenEye OEToolkits 1.7.6
Cc1c2n3c(c1CCC(=O)O)C=C4C(=C(C5=[N]4[Fe]36[N]7=C(C=C8N6C(=C5)C(=C8C)C=C)C(=C(C7=C2)C)C=C)C)CCC(=O)O
CACTVS 3.385
CC1=C(CCC(O)=O)C2=Cc3n4[Fe]5|6|N2=C1C=c7n5c(=CC8=N|6C(=Cc4c(C)c3CCC(O)=O)C(=C8C=C)C)c(C)c7C=C
ACDLabs 12.01
C=1c3c(c(c4C=C5C(=C(C=6C=C7C(=C(C8=CC=2C(=C(C=1N=2[Fe](n34)(N5=6)N78)CCC(=O)O)C)\C=C)C)\C=C)C)C)CCC(=O)O
Formula
C34 H32 Fe N4 O4
Name
PROTOPORPHYRIN IX CONTAINING FE;
HEME
ChEMBL
DrugBank
DB18267
ZINC
PDB chain
4jws Chain B Residue 501 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
4jws
Structural basis for effector control and redox partner recognition in cytochrome P450.
Resolution
2.15 Å
Binding residue
(original residue number in PDB)
R112 L245 G248 G249 T252 V253 D297 R299 Q322 T349 F350 G351 H355 C357 L358
Binding residue
(residue number reindexed from 1)
R93 L226 G229 G230 T233 V234 D278 R280 Q303 T330 F331 G332 H336 C338 L339
Annotation score
1
Enzymatic activity
Catalytic site (original residue number in PDB)
R186 G248 D251 T252 V253 C357 L358 G359 E366 V396
Catalytic site (residue number reindexed from 1)
R167 G229 D232 T233 V234 C338 L339 G340 E347 V377
Enzyme Commision number
1.14.15.1
: camphor 5-monooxygenase.
Gene Ontology
Molecular Function
GO:0004497
monooxygenase activity
GO:0005506
iron ion binding
GO:0005515
protein binding
GO:0016705
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0018683
camphor 5-monooxygenase activity
GO:0020037
heme binding
GO:0046872
metal ion binding
Biological Process
GO:0019383
(+)-camphor catabolic process
Cellular Component
GO:0005737
cytoplasm
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:4jws
,
PDBe:4jws
,
PDBj:4jws
PDBsum
4jws
PubMed
23744947
UniProt
P00183
|CPXA_PSEPU Camphor 5-monooxygenase (Gene Name=camC)
[
Back to BioLiP
]