Structure of PDB 4ix4 Chain B Binding Site BS01
Receptor Information
>4ix4 Chain B (length=350) Species:
296587
(Micromonas commoda) [
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LKARGGPKTLRRTPGVEPKDIRVLPGPLGSGNFGTVFRGVFKGDQDVVLK
NAKADVMAAEELLECEMDVNYHVHANAKGTCARFMGCIELGAKDGGEIYN
GTLTEGLWLMWANEGENTVEALMRRGTAPLATAMACADATELGVTKKAMR
ELLGSLARLHECGVVHRDVKPANLIAAEKDGGVLKLIDLGAAALCLPLPE
TLNYYPGDGPADPRYAKADELYLLPPGSPRPTKDNAAKLWEAHKPDRFDS
WSAGCVMLQLAVVGLRTDAGLERFLADYKAVGYDVNAFRGEKSGEYGTMD
FAALDANGGAGWDLCQRLMEAERDARASCEAALSHAFFDAAALEHHHHHH
Ligand information
Ligand ID
ADP
InChI
InChI=1S/C10H15N5O10P2/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(17)6(16)4(24-10)1-23-27(21,22)25-26(18,19)20/h2-4,6-7,10,16-17H,1H2,(H,21,22)(H2,11,12,13)(H2,18,19,20)/t4-,6-,7-,10-/m1/s1
InChIKey
XTWYTFMLZFPYCI-KQYNXXCUSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)CO[P@](=O)(O)OP(=O)(O)O)O)O)N
CACTVS 3.341
Nc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(=O)O[P](O)(O)=O)[CH](O)[CH]3O
ACDLabs 10.04
O=P(O)(O)OP(=O)(O)OCC3OC(n2cnc1c(ncnc12)N)C(O)C3O
CACTVS 3.341
Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO[P@@](O)(=O)O[P](O)(O)=O)[C@@H](O)[C@H]3O
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COP(=O)(O)OP(=O)(O)O)O)O)N
Formula
C10 H15 N5 O10 P2
Name
ADENOSINE-5'-DIPHOSPHATE
ChEMBL
CHEMBL14830
DrugBank
DB16833
ZINC
ZINC000012360703
PDB chain
4ix4 Chain B Residue 601 [
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Receptor-Ligand Complex Structure
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PDB
4ix4
Structure of the catalytic domain of a state transition kinase homolog from Micromonas algae
Resolution
1.499 Å
Binding residue
(original residue number in PDB)
L178 G179 S180 G181 V186 V198 A262 N263 E264 I325 I337
Binding residue
(residue number reindexed from 1)
L28 G29 S30 G31 V36 V48 A112 N113 E114 I175 I187
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0004672
protein kinase activity
GO:0005524
ATP binding
Biological Process
GO:0006468
protein phosphorylation
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Molecular Function
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Biological Process
External links
PDB
RCSB:4ix4
,
PDBe:4ix4
,
PDBj:4ix4
PDBsum
4ix4
PubMed
23794031
UniProt
C1EBN1
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