Structure of PDB 4h26 Chain B Binding Site BS01
Receptor Information
>4h26 Chain B (length=188) Species:
9606
(Homo sapiens) [
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TRPRFLELLKSECHFFNGTERVRFLERYFHNQEEFVRFDSDVGEYRAVTE
LGRPVAESWNSQKDLLEQKRGQVDTYCRHNYGVVESFTVQRRVHPQVTVY
PAKTQPLQHHNLLVCSVSGFYPGSIEVRWFRNGQEEKTGVVSTGLIHNGD
WTFQTLVMLETVPRSGEVYTCQVEHPSVTSPLTVEWRA
Ligand information
>4h26 Chain C (length=11) [
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QWIRVNIPKRI
Receptor-Ligand Complex Structure
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PDB
4h26
T-cell receptor (TCR) interaction with peptides that mimic nickel offers insight into nickel contact allergy.
Resolution
2.5 Å
Binding residue
(original residue number in PDB)
L11 F26 E28 Y30 F37 W61 Q64 Q74 T77 Y78 H81 N82 V85
Binding residue
(residue number reindexed from 1)
L9 F24 E26 Y28 F35 W59 Q62 Q72 T75 Y76 H79 N80 V83
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Biological Process
GO:0002250
adaptive immune response
GO:0002504
antigen processing and presentation of peptide or polysaccharide antigen via MHC class II
GO:0006955
immune response
GO:0019882
antigen processing and presentation
Cellular Component
GO:0005764
lysosome
GO:0005765
lysosomal membrane
GO:0005768
endosome
GO:0010008
endosome membrane
GO:0016020
membrane
GO:0042613
MHC class II protein complex
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Biological Process
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Cellular Component
External links
PDB
RCSB:4h26
,
PDBe:4h26
,
PDBj:4h26
PDBsum
4h26
PubMed
23091041
UniProt
B8YAC7
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