Structure of PDB 4gjs Chain B Binding Site BS01

Receptor Information
>4gjs Chain B (length=122) Species: 1895 (Streptomyces avidinii) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
DEAGITGTWYNQLGSTFIVTAGADGALTGTYESAVGNAESRYVLTGRYDS
APATDGSGTALGWTVAWKNNYRNAHSATTWSGQYVGGAEARINTQWLLTS
GTTEANAWHSTLVGHDTFTKVK
Ligand information
Ligand ID0OD
InChIInChI=1S/C21H32N3O2S.3ClH.Rh/c1-12-13(2)15(4)16(14(12)3)9-10-22-19(25)8-6-5-7-18-20-17(11-27-18)23-21(26)24-20;;;;/h17-18,20H,5-11H2,1-4H3,(H,22,25)(H2,23,24,26);3*1H;/q;;;;+4/p-3/t17-,18-,20-;;;;/m0..../s1
InChIKeyZUVIAMPSTWXRBZ-PCIMLXTCSA-K
SMILES
SoftwareSMILES
CACTVS 3.370CC1|2=C|3(C)[C]4(C)C|5(=C1(C)|[Rh+]|2|34|5(Cl)(Cl)Cl)CCNC(=O)CCCC[CH]6SC[CH]7NC(=O)N[CH]67
ACDLabs 12.01O=C1NC2C(SCC2N1)CCCCC(=O)NCCc37c4(C)c5(C)c6(C)C3(C)[Rh+]4567(Cl)(Cl)Cl
OpenEye OEToolkits 1.7.6CC12=C3([Rh+]145(C2(=C4(C53C)CCNC(=O)CCCCC6C7C(CS6)NC(=O)N7)C)(Cl)(Cl)Cl)C
CACTVS 3.370CC1|2=C|3(C)[C@@]4(C)C|5(=C1(C)|[Rh+]|2|34|5(Cl)(Cl)Cl)CCNC(=O)CCCC[C@@H]6SC[C@@H]7NC(=O)N[C@H]67
FormulaC21 H32 Cl3 N3 O2 Rh S
Nametrichloro{(1,2,3,4,5-eta)-1,2,3,4-tetramethyl-5-[2-({5-[(3aS,4S,6aR)-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl]pentanoyl}amino)ethyl]cyclopentadienyl}rhodium(1+);
[Cp*(Biot-methylene)RhCl(H2O)2]+
ChEMBL
DrugBank
ZINC
PDB chain4gjs Chain B Residue 400 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB4gjs A dual anchoring strategy for the localization and activation of artificial metalloenzymes based on the biotin-streptavidin technology.
Resolution1.85 Å
Binding residue
(original residue number in PDB)
N23 L25 S27 Y43 S45 V47 G48 N49 W79 T90 W108 D128
Binding residue
(residue number reindexed from 1)
N11 L13 S15 Y31 S33 V35 G36 N37 W67 T78 W96 D116
Annotation score1
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Cellular Component
GO:0005576 extracellular region

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Molecular Function

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Cellular Component
External links
PDB RCSB:4gjs, PDBe:4gjs, PDBj:4gjs
PDBsum4gjs
PubMed23496309
UniProtP22629|SAV_STRAV Streptavidin

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