Structure of PDB 4g68 Chain B Binding Site BS01
Receptor Information
>4g68 Chain B (length=392) Species:
862261
(Caldanaerobius) [
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ITLTFWNLFTGEPAKTKVKEIIDQWNKENPNVQIVESVTENDAYKTKIKA
AIAANEAPDIFQTWAGGFSQPFVEAGKVLQLDSYLNDGTKDQLLPGSFDN
VTYNGKIYGIPFDQQASVLYINKELFDKYNVKVPTTFSELIDAIKTFKSK
GVTPFALGEKDEWPGMWYYDMIALREGGVQLTRDALNGKASFDNQAFTDA
AQKLQDMVNAGAFDSGFMGLTRDEATAEFNQGKAAMYFGGNFDAAAFVSD
PSSLVKGKIEAVRFPTIEGGKGDPTEYIGGTVGALMVSANSKYKDEAVRA
AKYLAKQLSDMDYLIATGLPAWKYDNIDQSKVDPLEIQIMNNIVANAKGS
VPAWDIYLSGDAAQTHKDLVAQLFAKQITPEEYSKQMQQKIN
Ligand information
Ligand ID
XYS
InChI
InChI=1S/C5H10O5/c6-2-1-10-5(9)4(8)3(2)7/h2-9H,1H2/t2-,3+,4-,5+/m1/s1
InChIKey
SRBFZHDQGSBBOR-LECHCGJUSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
C1C(C(C(C(O1)O)O)O)O
CACTVS 3.341
O[CH]1CO[CH](O)[CH](O)[CH]1O
OpenEye OEToolkits 1.5.0
C1[C@H]([C@@H]([C@H]([C@H](O1)O)O)O)O
CACTVS 3.341
O[C@@H]1CO[C@H](O)[C@H](O)[C@H]1O
ACDLabs 10.04
OC1C(O)COC(O)C1O
Formula
C5 H10 O5
Name
alpha-D-xylopyranose;
alpha-D-xylose;
D-xylose;
xylose;
XYLOPYRANOSE
ChEMBL
DrugBank
DB03389
ZINC
ZINC000001529214
PDB chain
4g68 Chain E Residue 1 [
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Receptor-Ligand Complex Structure
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PDB
4g68
Biochemical and Structural Insights into Xylan Utilization by the Thermophilic Bacterium Caldanaerobius polysaccharolyticus.
Resolution
1.8 Å
Binding residue
(original residue number in PDB)
F33 G35 R246 T341
Binding residue
(residue number reindexed from 1)
F9 G11 R222 T317
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
External links
PDB
RCSB:4g68
,
PDBe:4g68
,
PDBj:4g68
PDBsum
4g68
PubMed
22918832
UniProt
J9PBT5
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