Structure of PDB 4f1n Chain B Binding Site BS01

Receptor Information
>4f1n Chain B (length=853) Species: 436907 (Vanderwaltozyma polyspora DSM 70294) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
AIYKVENRHDYGTKGTKVDILTNHILLAVGNDVPTEKIDKELVPKLDGWW
KTAFIFTYHIDFKPKKYELIEALLDEDEILYKYRDRIAFNGEDTIYSHVP
LEEFTLFDGCWEEMVSQITLKFSGKVGLKDIYNDTTTQDTEVQESRMSAI
DKTCLLSLLGAKFMSTDDLIFQVQGNKFFIFNNFAKAIPFQIGGYLLQGF
TVSLTHVYGGVALNTVSVPAPFIKHTKYLPGDPRFKNNEKEQFTLMDWII
ECYHQSKAIRDIRYNPKTAPPPSVKDLNYFVEKNTDISALLKGLKVYRPY
INSSKGIVVPPECLTIVPGQKLKGQIFDTKTYIDFSAIRPTEKFDLISRL
SMPAIKRGLTDNSAYQFMRVPSRILDAPVVQFKESTFEYKDKSYGTKHEE
SKGNWNMKGHQFISTPAKQVNLRAIFINNANTAPPASMESELDISMDKFA
SDVKQLGVDFNVSGKPILINQFGPPIKTFETSPGEISLLNLLENIPSNTY
ILYVLRRGNDSAVYDRLKYITDLKFGALNSCVVWDNFKKNSIQYNSNVVM
KMNLKLLGSNHSLSIENNKLLIDKESNLPILVLGSDVTHYPEKDQNSIAS
LVGSYDDKFTQFPGDYMLQDGPGEEIITNVGSLMLNRLKIYQKHNNGKLP
TKIMYFRDGVSVDQFSQVVKIEVKSIKESVRKFGPQLNGGNKYDPPVTCI
ATVKRNQVRFIPIQENAKNEKGEEVAVQSMGNVMPGTVVDRGITSVAHFD
FFIQSHQALKGTGVPCHYWCLYDENQSTSDYLQEICNNLCYIFGRSTTSV
KVPAPVYYADLLCTRATCFFKAGFELNMAQATVSKNVLLPQVNDNIKSVM
YYI
Ligand information
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB4f1n Structure of yeast Argonaute with guide RNA.
Resolution3.187 Å
Binding residue
(original residue number in PDB)
Q444 Y681 I682 Y902 K906 C919 V921 N924 Y932 N935 V936 K939 R1093 H1144 L1147 K1148 G1151 F1181 R1183 S1184 T1186 V1188 K1189 Y1195
Binding residue
(residue number reindexed from 1)
Q174 Y332 I333 Y514 K518 C531 V533 N536 Y544 N547 V548 K551 R705 H756 L759 K760 G763 F793 R795 S796 T798 V800 K801 Y807
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003676 nucleic acid binding
GO:0003723 RNA binding

View graph for
Molecular Function
External links
PDB RCSB:4f1n, PDBe:4f1n, PDBj:4f1n
PDBsum4f1n
PubMed22722195
UniProtA7TMA9

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