Structure of PDB 4aiz Chain B Binding Site BS01

Receptor Information
>4aiz Chain B (length=106) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
ELMQPPSVSVSPGQTARITCSGDALPKQYAYWYQQKPGQAPVLVIYKDSE
RPSGIPERFSGSSSGTTVTLTISGVQAEDEADYYCQSADSSGTYVVFGGG
TKLVVL
Ligand information
Ligand ID88Q
InChIInChI=1S/C12H22O6/c13-5-11(15)3-1-9(17-7-11)10-2-4-12(16,6-14)8-18-10/h9-10,13-16H,1-8H2/t9-,10-,11-,12-/m0/s1
InChIKeyFJMBBGDZFKPKCM-BJDJZHNGSA-N
SMILES
SoftwareSMILES
CACTVS 3.385OC[C@@]1(O)CC[C@H](OC1)[C@@H]2CC[C@](O)(CO)CO2
ACDLabs 12.01OCC1(O)CCC(OC1)C2OCC(O)(CO)CC2
OpenEye OEToolkits 1.9.2C1C[C@@](CO[C@@H]1[C@@H]2CC[C@@](CO2)(CO)O)(CO)O
OpenEye OEToolkits 1.9.2C1CC(COC1C2CCC(CO2)(CO)O)(CO)O
CACTVS 3.385OC[C]1(O)CC[CH](OC1)[CH]2CC[C](O)(CO)CO2
FormulaC12 H22 O6
Name1,5:6,10-dianhydro-3,4,7,8-tetradeoxy-2,9-bis-C-(hydroxymethyl)-L-manno-decitol
ChEMBL
DrugBank
ZINCZINC000095920657
PDB chain4aiz Chain D Residue 1109 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB4aiz Site-Directed Mutagenesis Reveals Regions Implicated in the Stability and Fiber Formation of Human Lambda3R Light Chains.
Resolution1.75 Å
Binding residue
(original residue number in PDB)		Q37 P39 G40 Q41 P43
Binding residue
(residue number reindexed from 1)		Q35 P37 G38 Q39 P41
Annotation score1
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Cellular Component
GO:0005576 extracellular region

View graph for
Cellular Component
External links
PDB RCSB:4aiz, PDBe:4aiz, PDBj:4aiz
PDBsum4aiz
PubMed25505244
UniProtQ5NV90

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