Structure of PDB 3zdy Chain B Binding Site BS01

Receptor Information

>3zdy Chain B (length=464) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

NICTTRGVSSCQQCLAVSPMCAWCSDEALPLGSPRCDLKENLLKDNCAPE
SIEFPVSEARVLEDRPLSDKGSGDSSQVTQVSPQRIALRLRPDDSKNFSI
QVRQVEDYPVDIYYLMDLSYSMKDDLWSIQNLGTKLATQMRKLTSNLRIG
FGAFVDKPVSPYMYISPPEALENPCYDMKTTCLPMFGYKHVLTLTDQVTR
FNEEVKKQSVSRNRDAPEGGFDAIMQATVCDEKIGWRNDASHLLVFTTDA
KTHIALDGRLAGIVQPNDGQCHVGSDNHYSASTTMDYPSLGLMTEKLSQK
NINLIFAVTENVVNLYQNYSELIPGTTVGVLSMDSSNVLQLIVDAYGKIR
SKVELEVRDLPEELSLSFNATCLNNEVIPGLKSCMGLKIGDTVSFSIEAK
VRGCPQEKEKSFTIKPVGFKDSLIVQVTFDCDCACQAQAEPNSHRCNNGN
GTFECGVCRCGPGW

Ligand information

>3zdy Chain I (length=6) Species: 9606 (Homo sapiens) [Search peptide sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

GRGDSP

Receptor-Ligand Complex Structure

Global view

Local view

Structure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

PDB	3zdy Complete Integrin Headpiece Opening in Eight Steps.
Resolution	2.45 Å
Binding residue (original residue number in PDB)	S121 Y122 S123 N215 A218
Binding residue (residue number reindexed from 1)	S119 Y120 S121 N213 A216

Enzymatic activity

Enzyme Commision number

External links

PDB	RCSB:3zdy, PDBe:3zdy, PDBj:3zdy
PDBsum	3zdy
PubMed	23798730
UniProt	P05106\|ITB3_HUMAN Integrin beta-3 (Gene Name=ITGB3)

[Back to BioLiP]