Structure of PDB 3ws6 Chain B Binding Site BS01
Receptor Information
>3ws6 Chain B (length=270) Species:
10090
(Mus musculus) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
PHSMRYFETAVSRPEPRYISVGYVDNKEFVRFDSDAENPRYEPRAPWMEQ
EGPEYWERETQKAKGQEQWFRVSLRNLLGYYNQSAGGSHTLQQMSGCDLG
SDWRLLRGYLQFAYEGRDYIALNEDLKTWTAADMAAQITRRKWEQSGAAE
HYKAYLEGECVEWLHRYLKNGNATLLRTDSPKAHVTHHPRSKGEVTLRCW
ALGFYPADITLTWQLNGEELTMELVETRPAGDGTFQKWASVVVPLGKEQN
YTCRVYHEGLPEPLTLRWEP
Ligand information
>3ws6 Chain F (length=9) [
Search peptide sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
YAIENYLEL
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
3ws6
Compensatory mechanisms allow undersized anchor-deficient class I MHC ligands to mediate pathogenic autoreactive T cell responses
Resolution
1.98 Å
Binding residue
(original residue number in PDB)
Y31 E87 K90 Q94 W97 S101 N104 Y108 L119 Q121 T167 K170 W171 A176 H179 Y180 Y183 E187 W191 Y195
Binding residue
(residue number reindexed from 1)
Y6 E59 K62 Q66 W69 S73 N76 Y80 L91 Q93 T139 K142 W143 A148 H151 Y152 Y155 E159 W163 Y167
Enzymatic activity
Enzyme Commision number
?
External links
PDB
RCSB:3ws6
,
PDBe:3ws6
,
PDBj:3ws6
PDBsum
3ws6
PubMed
25063871
UniProt
P01899
|HA11_MOUSE H-2 class I histocompatibility antigen, D-B alpha chain (Gene Name=H2-D1)
[
Back to BioLiP
]
