Structure of PDB 3vkd Chain B Binding Site BS01

Receptor Information
>3vkd Chain B (length=252) Species: 566461 (Streptomyces viridosporus ATCC 14672) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
PPLWRPGRVLARLREHQPGPVHIIDPFKVPVTEAVEKAAELTRLGFAAVL
LASTDYESFESHMEPYVAAVKAATPLPVVLHFPPRPGAGFPVVRGADALL
LPALLGSGDDYFVWKSFLETLAAFPGRIPREEWPELLLTVALTFGEDPRT
GDLLGTVPVSTASTEEIDRYLHVARAFGFHMVYLYSRNEHVPPEVVRHFR
KGLGPDQVLFVSGNVRSGRQVTEYLDSGADYVGFAGALEQPDWRSALAEI
AG
Ligand information
Ligand IDMG
InChIInChI=1S/Mg/q+2
InChIKeyJLVVSXFLKOJNIY-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Mg+2]
CACTVS 3.341[Mg++]
FormulaMg
NameMAGNESIUM ION
ChEMBL
DrugBankDB01378
ZINC
PDB chain3vkd Chain A Residue 800 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB3vkd Insights into the mechanism of the antibiotic-synthesizing enzyme MoeO5 from crystal structures of different complexes
Resolution1.66 Å
Binding residue
(original residue number in PDB)
L137 A138 F140
Binding residue
(residue number reindexed from 1)
L121 A122 F124
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0016740 transferase activity
GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups
GO:0046872 metal ion binding
Biological Process
GO:0008654 phospholipid biosynthetic process

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Molecular Function

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Biological Process
External links
PDB RCSB:3vkd, PDBe:3vkd, PDBj:3vkd
PDBsum3vkd
PubMed22431288
UniProtA0A011

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