Structure of PDB 3vht Chain B Binding Site BS01

Receptor Information
>3vht Chain B (length=259) Species: 6100,9606 [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
SKGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTLKFICTTG
KLPVPWPTLVTTFVQCFARYPDHMKQHDFFKSAMPEGYVQERTIFFKDDG
NYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNYNSHNVYIMA
DKQKNGIKVNFKIRHNIEDGSVQLADHYQQNTPIGDGPVLLPDNHYLSTQ
SALSKDPNEKRDHMVLLEFVTAAGISQLHQVQCPVCQQMMPAAHINSHLD
RCLLLHPAG
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain3vht Chain B Residue 401 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB3vht A novel mode of ubiquitin recognition by the ubiquitin-binding zinc finger domain of WRNIP1.
Resolution2.4 Å
Binding residue
(original residue number in PDB)		C244 C247 H259 C263
Binding residue
(residue number reindexed from 1)		C233 C236 H248 C252
Annotation score4
Enzymatic activity
Enzyme Commision number 3.6.1.-
3.6.1.3: Deleted entry.
Gene Ontology
Molecular Function
GO:0003674 molecular_function
GO:0003677 DNA binding
Biological Process
GO:0006091 generation of precursor metabolites and energy
GO:0006281 DNA repair
GO:0008218 bioluminescence
Cellular Component
GO:0005575 cellular_component

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:3vht, PDBe:3vht, PDBj:3vht
PDBsum3vht
PubMed27062441
UniProtP42212|GFP_AEQVI Green fluorescent protein (Gene Name=GFP);
Q96S55

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