Structure of PDB 3uzp Chain B Binding Site BS01

Receptor Information
>3uzp Chain B (length=284) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
LRVGNRYRLGRKIGSGDIYLGTDIAAGEEVAIKLECVKTHIESKIYKMMQ
GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLAD
QMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDAR
THQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGS
LPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRF
DDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLK
Ligand information
Ligand ID0CK
InChIInChI=1S/C19H20FN5/c20-14-8-6-13(7-9-14)17-18(16-10-11-22-19(21)24-16)25(12-23-17)15-4-2-1-3-5-15/h6-12,15H,1-5H2,(H2,21,22,24)
InChIKeyWUDBUIUHVNECTM-UHFFFAOYSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.7.6c1cc(ccc1c2c(n(cn2)C3CCCCC3)c4ccnc(n4)N)F
CACTVS 3.370Nc1nccc(n1)c2n(cnc2c3ccc(F)cc3)C4CCCCC4
ACDLabs 12.01Fc4ccc(c1ncn(c1c2nc(ncc2)N)C3CCCCC3)cc4
FormulaC19 H20 F N5
Name4-[1-cyclohexyl-4-(4-fluorophenyl)-1H-imidazol-5-yl]pyrimidin-2-amine
ChEMBLCHEMBL1951415
DrugBank
ZINCZINC000038237880
PDB chain3uzp Chain B Residue 295 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB3uzp Structural basis for the interaction between casein kinase 1 delta and a potent and selective inhibitor.
Resolution1.94 Å
Binding residue
(original residue number in PDB)		I23 A36 K38 M80 M82 L85 L135 I148
Binding residue
(residue number reindexed from 1)		I18 A31 K33 M70 M72 L75 L125 I138
Annotation score1
Binding affinityBindingDB: IC50=13nM
Enzymatic activity
Catalytic site (original residue number in PDB) D128 K130
Catalytic site (residue number reindexed from 1) D118 K120
Enzyme Commision number 2.7.11.1: non-specific serine/threonine protein kinase.
2.7.11.26: [tau protein] kinase.
Gene Ontology
Molecular Function
GO:0004672 protein kinase activity
GO:0005524 ATP binding
Biological Process
GO:0006468 protein phosphorylation

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:3uzp, PDBe:3uzp, PDBj:3uzp
PDBsum3uzp
PubMed22168824
UniProtP48730|KC1D_HUMAN Casein kinase I isoform delta (Gene Name=CSNK1D)

[Back to BioLiP]