Structure of PDB 3stw Chain B Binding Site BS01
Receptor Information
>3stw Chain B (length=259) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
PFVKKHFVLVHTAFHGAWCWYKIVALMRSSGHNVTALDLGASGINPKQAL
QIPNFSDYLSPLMEFMASLPANEKIILVGHALGGLAISKAMETFPEKISV
AVFLSGLMPGPNIDATTVCTKAGSAVLGQLDNCVTYENGPTNPPTTLIAG
PKFLATNVYHLSPIEDLALATALVRPLYLYLAEDISKEVVLSSKRYGSVK
RVFIVATENDALKKEFLKLMIEKNPPDEVKEIEGSDHVTMMSKPQQLFTT
LLSIANKYK
Ligand information
Ligand ID
2TD
InChI
InChI=1S/C13H24O/c1-3-4-5-6-7-8-9-10-11-12-13(2)14/h3H,1,4-12H2,2H3
InChIKey
UYCZPLKICNDOCL-UHFFFAOYSA-N
SMILES
Software
SMILES
CACTVS 3.341
OpenEye OEToolkits 1.5.0
CC(=O)CCCCCCCCCC=C
ACDLabs 10.04
O=C(CCCCCCCCC\C=C)C
Formula
C13 H24 O
Name
tridec-12-en-2-one
ChEMBL
DrugBank
ZINC
PDB chain
3stw Chain B Residue 266 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
3stw
Emergent Decarboxylase Activity and Attenuation of alpha/beta-Hydrolase Activity during the Evolution of Methylketone Biosynthesis in Tomato.
Resolution
2.31 Å
Binding residue
(original residue number in PDB)
T18 H243
Binding residue
(residue number reindexed from 1)
T12 H237
Annotation score
1
Enzymatic activity
Catalytic site (original residue number in PDB)
T18 A87 L88 N215 H243 V244
Catalytic site (residue number reindexed from 1)
T12 A81 L82 N209 H237 V238
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0080030
methyl indole-3-acetate esterase activity
GO:0080031
methyl salicylate esterase activity
GO:0080032
methyl jasmonate esterase activity
Biological Process
GO:0009694
jasmonic acid metabolic process
GO:0009696
salicylic acid metabolic process
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:3stw
,
PDBe:3stw
,
PDBj:3stw
PDBsum
3stw
PubMed
22523203
UniProt
E0YCS2
[
Back to BioLiP
]