Structure of PDB 3s86 Chain B Binding Site BS01
Receptor Information
>3s86 Chain B (length=189) Species:
2336
(Thermotoga maritima) [
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KLTVYLATTNPHKVEEIKMIAPEWMEILPSPEKIEVVEDGETFLENSVKK
AVVYGKKLKHPVMADDSGLVIYSLGGFPGVMSARFMEEHSYKEKMRTILK
MLEGKDRRAAFVCSATFFDPVENTLISVEDRVEGRIANEIRGTGGFGYDP
FFIPDGYDKTFGEIPHLKEKISHRSKAFRKLFSVLEKIL
Ligand information
Ligand ID
IMP
InChI
InChI=1S/C10H13N4O8P/c15-6-4(1-21-23(18,19)20)22-10(7(6)16)14-3-13-5-8(14)11-2-12-9(5)17/h2-4,6-7,10,15-16H,1H2,(H,11,12,17)(H2,18,19,20)/t4-,6-,7-,10-/m1/s1
InChIKey
GRSZFWQUAKGDAV-KQYNXXCUSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.7.5
c1nc2c(n1[C@H]3[C@@H]([C@@H]([C@H](O3)COP(=O)(O)O)O)O)N=CNC2=O
ACDLabs 10.04
O=C1c2ncn(c2N=CN1)C3OC(C(O)C3O)COP(=O)(O)O
OpenEye OEToolkits 1.7.5
c1nc2c(n1C3C(C(C(O3)COP(=O)(O)O)O)O)N=CNC2=O
CACTVS 3.385
O[CH]1[CH](O)[CH](O[CH]1CO[P](O)(O)=O)n2cnc3C(=O)NC=Nc23
CACTVS 3.385
O[C@H]1[C@@H](O)[C@@H](O[C@@H]1CO[P](O)(O)=O)n2cnc3C(=O)NC=Nc23
Formula
C10 H13 N4 O8 P
Name
INOSINIC ACID
ChEMBL
CHEMBL1207374
DrugBank
DB04566
ZINC
ZINC000004228242
PDB chain
3s86 Chain B Residue 197 [
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Receptor-Ligand Complex Structure
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PDB
3s86
Structural and functional characterization of a noncanonical nucleoside triphosphate pyrophosphatase from Thermotoga maritima.
Resolution
2.15 Å
Binding residue
(original residue number in PDB)
K15 E40 D68 S69 S84 A85 Y93 F113 F148 Y150 D151 K170 H175 R176
Binding residue
(residue number reindexed from 1)
K13 E38 D66 S67 S82 A83 Y91 F111 F146 Y148 D149 K168 H173 R174
Annotation score
4
Enzymatic activity
Enzyme Commision number
3.6.1.66
: XTP/dITP diphosphatase.
Gene Ontology
Molecular Function
GO:0000166
nucleotide binding
GO:0016787
hydrolase activity
GO:0017111
ribonucleoside triphosphate phosphatase activity
GO:0035870
dITP diphosphatase activity
GO:0036220
ITP diphosphatase activity
GO:0036222
XTP diphosphatase activity
GO:0046872
metal ion binding
GO:0047429
nucleoside triphosphate diphosphatase activity
Biological Process
GO:0009117
nucleotide metabolic process
GO:0009143
nucleoside triphosphate catabolic process
GO:0009146
purine nucleoside triphosphate catabolic process
Cellular Component
GO:0005737
cytoplasm
GO:0005829
cytosol
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Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:3s86
,
PDBe:3s86
,
PDBj:3s86
PDBsum
3s86
PubMed
23385455
UniProt
Q9WY06
|IXTPA_THEMA dITP/XTP pyrophosphatase (Gene Name=TM_0159)
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