Structure of PDB 3rsh Chain B Binding Site BS01
Receptor Information
>3rsh Chain B (length=247) Species:
243277
(Vibrio cholerae O1 biovar El Tor str. N16961) [
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MSQFMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAIS
DYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLM
RMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNA
GQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKLNDEQR
TATLAQVPAGRLGDPREIASAVAFLASPEAAYITGETLHVNGGMYMI
Ligand information
Ligand ID
NAP
InChI
InChI=1S/C21H28N7O17P3/c22-17-12-19(25-7-24-17)28(8-26-12)21-16(44-46(33,34)35)14(30)11(43-21)6-41-48(38,39)45-47(36,37)40-5-10-13(29)15(31)20(42-10)27-3-1-2-9(4-27)18(23)32/h1-4,7-8,10-11,13-16,20-21,29-31H,5-6H2,(H7-,22,23,24,25,32,33,34,35,36,37,38,39)/t10-,11-,13-,14-,15-,16-,20-,21-/m1/s1
InChIKey
XJLXINKUBYWONI-NNYOXOHSSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
c1cc(c[n+](c1)C2C(C(C(O2)COP(=O)([O-])OP(=O)(O)OCC3C(C(C(O3)n4cnc5c4ncnc5N)OP(=O)(O)O)O)O)O)C(=O)N
CACTVS 3.341
NC(=O)c1ccc[n+](c1)[CH]2O[CH](CO[P]([O-])(=O)O[P](O)(=O)OC[CH]3O[CH]([CH](O[P](O)(O)=O)[CH]3O)n4cnc5c(N)ncnc45)[CH](O)[CH]2O
CACTVS 3.341
NC(=O)c1ccc[n+](c1)[C@@H]2O[C@H](CO[P]([O-])(=O)O[P@@](O)(=O)OC[C@H]3O[C@H]([C@H](O[P](O)(O)=O)[C@@H]3O)n4cnc5c(N)ncnc45)[C@@H](O)[C@H]2O
OpenEye OEToolkits 1.5.0
c1cc(c[n+](c1)[C@H]2[C@@H]([C@@H]([C@H](O2)CO[P@@](=O)([O-])O[P@](=O)(O)OC[C@@H]3[C@H]([C@H]([C@@H](O3)n4cnc5c4ncnc5N)OP(=O)(O)O)O)O)O)C(=O)N
Formula
C21 H28 N7 O17 P3
Name
NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE;
2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE
ChEMBL
CHEMBL295069
DrugBank
DB03461
ZINC
PDB chain
3rsh Chain B Residue 255 [
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Receptor-Ligand Complex Structure
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PDB
3rsh
Dissecting the Structural Elements for the Activation of beta-Ketoacyl-(Acyl Carrier Protein) Reductase from Vibrio cholerae.
Resolution
1.95 Å
Binding residue
(original residue number in PDB)
G16 S18 R19 I21 T41 N63 V64 N90 A91 I93 V140 S142 Y155 K159 P185 G186 I188
Binding residue
(residue number reindexed from 1)
G16 S18 R19 I21 T41 N63 V64 N90 A91 I93 V140 S142 Y155 K159 P185 G186 I188
Annotation score
4
Enzymatic activity
Catalytic site (original residue number in PDB)
G20 N114 S142 Q152 Y155 K159
Catalytic site (residue number reindexed from 1)
G20 N114 S142 Q152 Y155 K159
Enzyme Commision number
1.1.1.100
: 3-oxoacyl-[acyl-carrier-protein] reductase.
Gene Ontology
Molecular Function
GO:0004316
3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity
GO:0016491
oxidoreductase activity
GO:0016616
oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0050661
NADP binding
GO:0051287
NAD binding
Biological Process
GO:0006633
fatty acid biosynthetic process
GO:0030497
fatty acid elongation
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:3rsh
,
PDBe:3rsh
,
PDBj:3rsh
PDBsum
3rsh
PubMed
26553852
UniProt
Q9KQH7
|FABG_VIBCH 3-oxoacyl-[acyl-carrier-protein] reductase FabG (Gene Name=fabG)
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