Structure of PDB 3qse Chain B Binding Site BS01
Receptor Information
>3qse Chain B (length=382) Species:
69000
(Bacillus sp. B-0618) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
STHFDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFDPPHTNGSHHGDTRI
IRHAYGEGREYVPLALRSQELWYELEKETHHKIFTKTGVLVFGPKGESAF
VAETMEAAKEHSLTVDLLEGDEINKRWPGITVPENYNAIFEPNSGVLFSE
NCIRAYRELAEARGAKVLTHTRVEDFDISPDSVKIETANGSYTADKLIVS
MGAWNSKLLSKLNLDIPLQPYRQVVGFFESDESKYSNDIDFPGFMVEVPN
GIYYGFPSFGGCGLKLGYHTFGQKIDPDTINREFGVYPEDESNLRAFLEE
YMPGANGELKRGAVCMYTKTLDEHFIIDLHPEHSNVVIAAGFSGHGFKFS
SGVGEVLSQLALTGKTEHDISIFSINRPALKE
Ligand information
Ligand ID
CL
InChI
InChI=1S/ClH/h1H/p-1
InChIKey
VEXZGXHMUGYJMC-UHFFFAOYSA-M
SMILES
Software
SMILES
ACDLabs 10.04
CACTVS 3.341
OpenEye OEToolkits 1.5.0
[Cl-]
Formula
Cl
Name
CHLORIDE ION
ChEMBL
DrugBank
DB14547
ZINC
PDB chain
3qse Chain B Residue 403 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
3qse
Probing oxygen activation sites in two flavoprotein oxidases using chloride as an oxygen surrogate.
Resolution
1.75 Å
Binding residue
(original residue number in PDB)
Y317 F342 G344
Binding residue
(residue number reindexed from 1)
Y317 F342 G344
Annotation score
1
Enzymatic activity
Catalytic site (original residue number in PDB)
H45 T48 R49 R52 S98 Y254 K265 H269 C315 H345 K348
Catalytic site (residue number reindexed from 1)
H45 T48 R49 R52 S98 Y254 K265 H269 C315 H345 K348
Enzyme Commision number
1.5.3.1
: sarcosine oxidasee (formaldehyde-forming).
Gene Ontology
Molecular Function
GO:0008115
sarcosine oxidase activity
GO:0016491
oxidoreductase activity
GO:0050660
flavin adenine dinucleotide binding
Cellular Component
GO:0005737
cytoplasm
GO:0005829
cytosol
View graph for
Molecular Function
View graph for
Cellular Component
External links
PDB
RCSB:3qse
,
PDBe:3qse
,
PDBj:3qse
PDBsum
3qse
PubMed
21568312
UniProt
P40859
|MSOX_BACB0 Monomeric sarcosine oxidase (Gene Name=soxA)
[
Back to BioLiP
]