Structure of PDB 3qay Chain B Binding Site BS01

Receptor Information
>3qay Chain B (length=180) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
HMKICITVGHSILKSGACTSADGVVNEYQYNKSLAPVLADTFRKEGHKVD
VIICPEKQFKTKNEEKSYKIPRVNSGGYDLLIELHLNASNGQGKGSEVLY
YSNKGLEYATRICDKLGTVFKNRGAKLDKRLYILNSSKPTAVLIESFFCD
NKEDYDKAKKLGHEGIAKLIVEGVLNKNIN
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain3qay Chain B Residue 180 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB3qay Structure-based modification of a Clostridium difficile-targeting endolysin affects activity and host range.
Resolution2.0 Å
Binding residue
(original residue number in PDB)
H9 E26 H84
Binding residue
(residue number reindexed from 1)
H10 E27 H85
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0008745 N-acetylmuramoyl-L-alanine amidase activity
Biological Process
GO:0009253 peptidoglycan catabolic process

View graph for
Molecular Function

View graph for
Biological Process
External links
PDB RCSB:3qay, PDBe:3qay, PDBj:3qay
PDBsum3qay
PubMed21803993
UniProtB6SBV8

[Back to BioLiP]