Structure of PDB 3p24 Chain B Binding Site BS01

Receptor Information
>3p24 Chain B (length=355) Species: 817 (Bacteroides fragilis) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
PVTASIDLQSVSYTDLATQLNDVSDFGKMIILKDNGFNRQVHVSMDKRTK
IQLDNENVRLFNGRDKDSTNFILGDEFAVLRFYRNGESISYIAYKEAQMM
NEIAEFYAAPFKKTRAINEKEAFECIYDSRTRSAGKYPVSVKINVDKAKK
ILNLPECDYINDYIKTPQRAVPSEPKTVYVICLRENGSTVYPNEVSAQMQ
DAANSVYAVHGLKRYVNLHFVLYTTEYACPSGNADEGLDGFTASLKANPK
AEGYDDQIYFLIRWGTWDNNILGISWLNSYNVNTASDFKASGMSTTQLMY
PGVMAHELGHILGANHADDPKDLMYSKYTGYLFHLSEKNMDIIAKNLGWE
IADGD
Ligand information
Ligand IDAZI
InChIInChI=1S/N3/c1-3-2/q-1
InChIKeyIVRMZWNICZWHMI-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
CACTVS 3.341
OpenEye OEToolkits 1.5.0
[N-]=[N+]=[N-]
FormulaN3
NameAZIDE ION
ChEMBLCHEMBL79455
DrugBank
ZINC
PDB chain3p24 Chain B Residue 509 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB3p24 Structure, function and latency regulation of a bacterial enterotoxin potentially derived from a mammalian adamalysin/ADAM xenolog.
Resolution1.8 Å
Binding residue
(original residue number in PDB)
M77 F93
Binding residue
(residue number reindexed from 1)
M45 F61
Annotation score1
Enzymatic activity
Enzyme Commision number 3.4.24.74: fragilysin.
Gene Ontology
Molecular Function
GO:0008237 metallopeptidase activity
GO:0008270 zinc ion binding
Biological Process
GO:0006508 proteolysis

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Molecular Function

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Biological Process
External links
PDB RCSB:3p24, PDBe:3p24, PDBj:3p24
PDBsum3p24
PubMed21233422
UniProtO86049

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