Structure of PDB 3nom Chain B Binding Site BS01

Receptor Information
>3nom Chain B (length=234) Species: 555217 (Zymomonas mobilis subsp. mobilis ATCC 10988) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
SIPIYDYQIVHSYPHDTKAFTEGFFYRNGYFYESTGLNGRSSIRKVDIES
GKTLQQIELGKRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVRSFN
YDGEGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPEL
NELEWVDGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPI
DVLNGIAWDKEHHRLFVTGKLWPKVFEITLTQRV
Ligand information
Ligand IDCA
InChIInChI=1S/Ca/q+2
InChIKeyBHPQYMZQTOCNFJ-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Ca++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Ca+2]
FormulaCa
NameCALCIUM ION
ChEMBL
DrugBankDB14577
ZINC
PDB chain3nom Chain B Residue 263 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB3nom Kinetic and structural characterization of bacterial glutaminyl cyclases from Zymomonas mobilis and Myxococcus xanthus
Resolution2.4 Å
Binding residue
(original residue number in PDB)		F48 E176 L177 E178 I230
Binding residue
(residue number reindexed from 1)		F24 E152 L153 E154 I206
Annotation score1
Enzymatic activity
Enzyme Commision number 2.3.2.5: glutaminyl-peptide cyclotransferase.
Gene Ontology
Molecular Function
GO:0016603 glutaminyl-peptide cyclotransferase activity
Biological Process
GO:0017186 peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase

View graph for
Molecular Function
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Biological Process
External links
PDB RCSB:3nom, PDBe:3nom, PDBj:3nom
PDBsum3nom
PubMed20868223
UniProtA0A0H3G2U5

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