Structure of PDB 3lx4 Chain B Binding Site BS01
Receptor Information
>3lx4 Chain B (length=407) Species:
3055
(Chlamydomonas reinhardtii) [
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LSHVQQALAELAKPKDDPTRKHVCVQVAPAVRVAIAETLGLAPGATTPKQ
LAEGLRRLGFDEVFDTLFGADLTIMEEGSELLHRLTEHLEAEPLPMFTSC
CPGWIAMLEKSYPDLIPYVSSCKSPQMMLAAMVKSYLAEKKGIAPKDMVM
VSIMPCTRKQSEADRDWFCVDTLRQLDHVITTVELGNIFKERGINLAELP
EGEWDNPMGVGSGAGVLFGTTGGVMEAALRTAYELFTGTPLPRLSLSEVR
GMDGIKETNITMVPAPGSKFEELLKHRAAGPLAWDGGAGFTSEDGRGGIT
LRVAVANGLGNAKKLITKMQAGEAKYDFVEIMACPAGCVGGGGQPRSTDK
AITQKRQAALYNLDEKSTLRRSHENPSIRELYDTYLGEPLGHKAHELLHT
HYVAGGV
Ligand information
Ligand ID
SF4
InChI
InChI=1S/4Fe.4S
InChIKey
LJBDFODJNLIPKO-UHFFFAOYSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 2.0.7
[S]12[Fe]3[S]4[Fe]1[S]5[Fe]2[S]3[Fe]45
CACTVS 3.385
S1[Fe]S[Fe]1.S2[Fe]S[Fe]2
Formula
Fe4 S4
Name
IRON/SULFUR CLUSTER
ChEMBL
DrugBank
ZINC
PDB chain
3lx4 Chain B Residue 458 [
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Receptor-Ligand Complex Structure
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PDB
3lx4
Stepwise [FeFe]-hydrogenase H-cluster assembly revealed in the structure of HydA(DeltaEFG).
Resolution
1.97 Å
Binding residue
(original residue number in PDB)
C130 C185 R187 M375 A376 C377 C381
Binding residue
(residue number reindexed from 1)
C101 C156 R158 M332 A333 C334 C338
Annotation score
4
Enzymatic activity
Catalytic site (original residue number in PDB)
E101 E104 C129 S149 K188 E191 W196 C381
Catalytic site (residue number reindexed from 1)
E77 E80 C100 S120 K159 E162 W167 C338
Enzyme Commision number
1.18.99.1
: Transferred entry: 1.12.7.2.
External links
PDB
RCSB:3lx4
,
PDBe:3lx4
,
PDBj:3lx4
PDBsum
3lx4
PubMed
20418861
UniProt
Q9FYU1
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