Structure of PDB 3lwo Chain B Binding Site BS01

Receptor Information
>3lwo Chain B (length=53) Species: 2261 (Pyrococcus furiosus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
FRIRKCPKCGRYTLKEVCPVCGEKTKVAHPPRFSPEDPYGEYRRRWKREV
LGI
Ligand information
>3lwo Chain D (length=58) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
gggccacggaaaccgcgcgcggugaucaaugagccgcguucgcucccgug
gcccacaa
<<<<<<<<<.......<<<<<<<.........>>>>>>>......>>>>>
>>>>....
Receptor-Ligand Complex Structure
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PDB3lwo Glycosidic bond conformation preference plays a pivotal role in catalysis of RNA pseudouridylation: a combined simulation and structural study.
Resolution2.855 Å
Binding residue
(original residue number in PDB)		R34 S36 E38
Binding residue
(residue number reindexed from 1)		R32 S34 E36
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0005515 protein binding
GO:0030515 snoRNA binding
Biological Process
GO:0001522 pseudouridine synthesis
GO:0006364 rRNA processing
GO:0042254 ribosome biogenesis
Cellular Component
GO:1990904 ribonucleoprotein complex

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Biological Process
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Cellular Component
External links
PDB RCSB:3lwo, PDBe:3lwo, PDBj:3lwo
PDBsum3lwo
PubMed20615421
UniProtQ8U1R4|NOP10_PYRFU Ribosome biogenesis protein Nop10 (Gene Name=nop10)

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