Structure of PDB 3lix Chain B Binding Site BS01

Receptor Information
>3lix Chain B (length=116) Species: 11908 (Human T-cell leukemia virus type I) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
PVIPLDPARRPVIKAQVDTQTSHPKTIEALLDTGADMTVIPIALFSSNTP
LKNTSVLGAGGQTQDHFKLTSLPVLIRLPFRTTPIVLTSCLVDTKNNWAI
IGRDALQQCQGVLYLP
Ligand information
Ligand IDE17
InChIInChI=1S/C42H62N6O7S/c1-27(40(2,3)4)43-38(53)35-42(8,9)56-26-48(35)39(54)33(50)30(24-28-16-12-10-13-17-28)44-37(52)34(41(5,6)7)46-36(51)32(29-18-14-11-15-19-29)45-31(49)25-47-20-22-55-23-21-47/h10-19,27,30,32-35,50H,20-26H2,1-9H3,(H,43,53)(H,44,52)(H,45,49)(H,46,51)/t27-,30+,32+,33+,34-,35-/m1/s1
InChIKeySJJQJWGUMHGALA-UOFFPLLDSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.7.0C[C@H](C(C)(C)C)NC(=O)[C@@H]1C(SCN1C(=O)[C@H]([C@H](Cc2ccccc2)NC(=O)[C@H](C(C)(C)C)NC(=O)[C@H](c3ccccc3)NC(=O)CN4CCOCC4)O)(C)C
CACTVS 3.370C[C@@H](NC(=O)[C@H]1N(CSC1(C)C)C(=O)[C@@H](O)[C@H](Cc2ccccc2)NC(=O)[C@@H](NC(=O)[C@@H](NC(=O)CN3CCOCC3)c4ccccc4)C(C)(C)C)C(C)(C)C
CACTVS 3.370C[CH](NC(=O)[CH]1N(CSC1(C)C)C(=O)[CH](O)[CH](Cc2ccccc2)NC(=O)[CH](NC(=O)[CH](NC(=O)CN3CCOCC3)c4ccccc4)C(C)(C)C)C(C)(C)C
OpenEye OEToolkits 1.7.0CC(C(C)(C)C)NC(=O)C1C(SCN1C(=O)C(C(Cc2ccccc2)NC(=O)C(C(C)(C)C)NC(=O)C(c3ccccc3)NC(=O)CN4CCOCC4)O)(C)C
ACDLabs 12.01O=C(NC(C)C(C)(C)C)C4N(C(=O)C(O)C(NC(=O)C(NC(=O)C(c1ccccc1)NC(=O)CN2CCOCC2)C(C)(C)C)Cc3ccccc3)CSC4(C)C
FormulaC42 H62 N6 O7 S
NameN-{(1S,2S)-1-benzyl-3-[(4R)-5,5-dimethyl-4-{[(1R)-1,2,2-trimethylpropyl]carbamoyl}-1,3-thiazolidin-3-yl]-2-hydroxy-3-oxopropyl}-3-methyl-N~2~-{(2S)-2-[(morpholin-4-ylacetyl)amino]-2-phenylacetyl}-L-valinamide;
KNI-10729
ChEMBL
DrugBank
ZINCZINC000098208816
PDB chain3lix Chain B Residue 117 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB3lix Crystal structures of inhibitor complexes of human T-cell leukemia virus (HTLV-1) protease.
Resolution2.7 Å
Binding residue
(original residue number in PDB)
D32 G34 D36 V56 L57 G58 A59
Binding residue
(residue number reindexed from 1)
D32 G34 D36 V56 L57 G58 A59
Annotation score1
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0004190 aspartic-type endopeptidase activity
GO:0008233 peptidase activity
GO:0046872 metal ion binding
Biological Process
GO:0006508 proteolysis

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Molecular Function

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Biological Process
External links
PDB RCSB:3lix, PDBe:3lix, PDBj:3lix
PDBsum3lix
PubMed20600105
UniProtQ82134

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