Structure of PDB 3hx9 Chain B Binding Site BS01
Receptor Information
>3hx9 Chain B (length=98) Species:
1773
(Mycobacterium tuberculosis) [
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PVVKINAIEVPAGAGPELEKRFAHRAHAVENSPGFLGFQLLRPVKGEERY
FVVTHWESDEAFQAWANGPAIAAHAGHRANPVATGASLLEFEVVLDVG
Ligand information
Ligand ID
HEM
InChI
InChI=1S/C34H34N4O4.Fe/c1-7-21-17(3)25-13-26-19(5)23(9-11-33(39)40)31(37-26)16-32-24(10-12-34(41)42)20(6)28(38-32)15-30-22(8-2)18(4)27(36-30)14-29(21)35-25;/h7-8,13-16H,1-2,9-12H2,3-6H3,(H4,35,36,37,38,39,40,41,42);/q;+2/p-2/b25-13-,26-13-,27-14-,28-15-,29-14-,30-15-,31-16-,32-16-;
InChIKey
KABFMIBPWCXCRK-RGGAHWMASA-L
SMILES
Software
SMILES
OpenEye OEToolkits 1.7.6
Cc1c2n3c(c1CCC(=O)O)C=C4C(=C(C5=[N]4[Fe]36[N]7=C(C=C8N6C(=C5)C(=C8C)C=C)C(=C(C7=C2)C)C=C)C)CCC(=O)O
CACTVS 3.385
CC1=C(CCC(O)=O)C2=Cc3n4[Fe]5|6|N2=C1C=c7n5c(=CC8=N|6C(=Cc4c(C)c3CCC(O)=O)C(=C8C=C)C)c(C)c7C=C
ACDLabs 12.01
C=1c3c(c(c4C=C5C(=C(C=6C=C7C(=C(C8=CC=2C(=C(C=1N=2[Fe](n34)(N5=6)N78)CCC(=O)O)C)\C=C)C)\C=C)C)C)CCC(=O)O
Formula
C34 H32 Fe N4 O4
Name
PROTOPORPHYRIN IX CONTAINING FE;
HEME
ChEMBL
DrugBank
DB18267
ZINC
PDB chain
3hx9 Chain B Residue 300 [
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Receptor-Ligand Complex Structure
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PDB
3hx9
Unusual Diheme Conformation of the Heme-Degrading Protein from Mycobacterium tuberculosis
Resolution
1.75 Å
Binding residue
(original residue number in PDB)
R22 R26 A29 W66 A67 A71 H75 A80
Binding residue
(residue number reindexed from 1)
R21 R25 A28 W65 A66 A70 H74 A79
Annotation score
4
Enzymatic activity
Enzyme Commision number
1.14.99.57
: heme oxygenase (mycobilin-producing).
Gene Ontology
Molecular Function
GO:0004392
heme oxygenase (decyclizing) activity
GO:0004497
monooxygenase activity
GO:0020037
heme binding
GO:0046872
metal ion binding
Biological Process
GO:0042167
heme catabolic process
Cellular Component
GO:0005886
plasma membrane
GO:0009274
peptidoglycan-based cell wall
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Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:3hx9
,
PDBe:3hx9
,
PDBj:3hx9
PDBsum
3hx9
PubMed
19917297
UniProt
P9WKH3
|MHUD_MYCTU Heme oxygenase (mycobilin-producing) (Gene Name=mhuD)
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