Structure of PDB 3ehh Chain B Binding Site BS01
Receptor Information
>3ehh Chain B (length=193) Species:
1423
(Bacillus subtilis) [
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IAELVKLEERQRMARDLVDTLGQKLSLMGLKSDLARKLIYKDPEQAAREL
KSVQQTARTSLNEVRKIVSSMKGIRLKDELINIKQILEAADIMFIYEEEK
WPENISLLNENILSMCLKEAVTNVVKHSQAKTCRVDIQQLWKEVVITVSD
DGTFKGEENSHGLLGMRERLEFANGSLHIDTENGTKLTMAIPN
Ligand information
Ligand ID
ADP
InChI
InChI=1S/C10H15N5O10P2/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(17)6(16)4(24-10)1-23-27(21,22)25-26(18,19)20/h2-4,6-7,10,16-17H,1H2,(H,21,22)(H2,11,12,13)(H2,18,19,20)/t4-,6-,7-,10-/m1/s1
InChIKey
XTWYTFMLZFPYCI-KQYNXXCUSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)CO[P@](=O)(O)OP(=O)(O)O)O)O)N
CACTVS 3.341
Nc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(=O)O[P](O)(O)=O)[CH](O)[CH]3O
ACDLabs 10.04
O=P(O)(O)OP(=O)(O)OCC3OC(n2cnc1c(ncnc12)N)C(O)C3O
CACTVS 3.341
Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO[P@@](O)(=O)O[P](O)(O)=O)[C@@H](O)[C@H]3O
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COP(=O)(O)OP(=O)(O)O)O)O)N
Formula
C10 H15 N5 O10 P2
Name
ADENOSINE-5'-DIPHOSPHATE
ChEMBL
CHEMBL14830
DrugBank
DB16833
ZINC
ZINC000012360703
PDB chain
3ehh Chain B Residue 3500 [
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Receptor-Ligand Complex Structure
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PDB
3ehh
Structural plasticity and catalysis regulation of a thermosensor histidine kinase
Resolution
2.1 Å
Binding residue
(original residue number in PDB)
N293 H297 S298 F324 K325 G326 H335 G336 L337
Binding residue
(residue number reindexed from 1)
N123 H127 S128 F154 K155 G156 H161 G162 L163
Annotation score
4
Enzymatic activity
Enzyme Commision number
2.7.13.3
: histidine kinase.
Gene Ontology
Molecular Function
GO:0000155
phosphorelay sensor kinase activity
GO:0046983
protein dimerization activity
Biological Process
GO:0000160
phosphorelay signal transduction system
Cellular Component
GO:0016020
membrane
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Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:3ehh
,
PDBe:3ehh
,
PDBj:3ehh
PDBsum
3ehh
PubMed
19805278
UniProt
O34757
|DESK_BACSU Sensor histidine kinase DesK (Gene Name=desK)
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