Structure of PDB 3auo Chain B Binding Site BS01 |
| >3auo Chain B (length=572) Species: 300852 (Thermus thermophilus HB8)
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MRNQELARIFEEIGLMSEFLGDNPFRVRAYHQAARTLYDLDTPIEEIAEK
GKEALMELPGVGPDLAEKILEFLRTGKVRKHEELSRKVPRGVLEVMEVPG
VGPKTARLLYEGLGIDSLEKLKAALDRGDLTRLKGFGPKRAERIREGLAL
AQAAGKRRPLGAVLSLARSLLEAIRALPGVERAELCGSARRYKDTVGDLD
FLVASREGERAVEGFVRLPQVKEVYAKGKERATVFLKNGLQVDLRVVPPE
SYGAGLQYLTGSKAHSIRLRALAQEKGLKLSEYGVFRGEKRIAGETEEEV
YAALGLPWIPPPLREDQGEVEAALEGRLPKLLELPQVKGDLQVHSTYSDG
QNTLEELWEAAKTMGYRYLAVTDHSPAVRVAGGPSPEEALKRVGEIRRFN
ETHGPPYLLAGAEVDIHPDGTLDYPDWVLRELDLVLVSVHSRFNLPKADQ
TKRLLKALENPFVHVLAHPTARLLGRRAPIEADWEAVFQKAKEKGVAVEI
DGYYDRMDLPDDLARMAYGMGLWISLSTDAHQTDHLRFMELAVGTAQRAW
IGPERVLNTLDYEDLLSWLKAR |
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| PDB | 3auo The structural basis of the kinetic mechanism of a gap-filling X-family DNA polymerase that binds Mg(2+)-dNTP before binding to DNA. |
| Resolution | 2.7 Å |
Binding residue
(original residue number in PDB) | N23 F25 R26 R28 Y30 G60 V61 G62 D64 L65 K80 P99 G100 V101 P103 K104 T105 K139 R140 K229 E230 R231 R245 Y258 R270 Q274 E275 K279 L280 E282 Y283 L324 E325 |
Binding residue
(residue number reindexed from 1) | N23 F25 R26 R28 Y30 G60 V61 G62 D64 L65 K80 P99 G100 V101 P103 K104 T105 K139 R140 K229 E230 R231 R245 Y258 R270 Q274 E275 K279 L280 E282 Y283 L324 E325 |
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| Enzyme Commision number |
2.7.7.7: DNA-directed DNA polymerase.
4.2.99.18: DNA-(apurinic or apyrimidinic site) lyase. |
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