Structure of PDB 2yvr Chain B Binding Site BS01

Receptor Information
>2yvr Chain B (length=45) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
GERTVYCNVHKHEPLVLFCESCDTLTCRDCQLNAHKDHQYQFLED
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain2yvr Chain B Residue 1003 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB2yvr Crystal structure of MS1043
Resolution1.8 Å
Binding residue
(original residue number in PDB)		C9 H12 C29 C32
Binding residue
(residue number reindexed from 1)		C7 H10 C27 C30
Annotation score4
Enzymatic activity
Enzyme Commision number 2.3.2.27: RING-type E3 ubiquitin transferase.
Gene Ontology
Molecular Function
GO:0008270 zinc ion binding

View graph for
Molecular Function
External links
PDB RCSB:2yvr, PDBe:2yvr, PDBj:2yvr
PDBsum2yvr
PubMed
UniProtQ13263|TIF1B_HUMAN Transcription intermediary factor 1-beta (Gene Name=TRIM28)

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