Structure of PDB 2y3y Chain B Binding Site BS01

Receptor Information
>2y3y Chain B (length=83) Species: 563041 (Helicobacter pylori G27) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
NDESKIAVLVVIYDHHQRELNQRMIDIQHASGTHVLCTTHIHMDEHNCLE
TIILQGNSFEIQRLQLEIGGLRGVKFAKLTKAS
Ligand information
Ligand IDNI
InChIInChI=1S/Ni/q+2
InChIKeyVEQPNABPJHWNSG-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Ni++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Ni+2]
FormulaNi
NameNICKEL (II) ION
ChEMBL
DrugBankDB14204
ZINC
PDB chain2y3y Chain B Residue 1143 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB2y3y Holo-Ni(2+)Helicobacter Pylori Nikr Contains Four Square-Planar Nickel-Binding Sites at Physiological Ph.
Resolution2.39 Å
Binding residue
(original residue number in PDB)
H99 H101 C107
Binding residue
(residue number reindexed from 1)
H40 H42 C48
Annotation score4
Enzymatic activity
Enzyme Commision number ?
External links
PDB RCSB:2y3y, PDBe:2y3y, PDBj:2y3y
PDBsum2y3y
PubMed21725560
UniProtB5Z8Y5|NIKR_HELPG Putative nickel-responsive regulator (Gene Name=HPG27_1286)

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