Structure of PDB 2xxz Chain B Binding Site BS01
Receptor Information
>2xxz Chain B (length=286) Species:
9606
(Homo sapiens) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
REKLNPPTPSIYLESKRDAFSPVLLQFCTDPRNPITVIRGLAGSLRLNLG
LFSTKTLVEASGEHTVEVRTQVQQPSDENWDLTGTRQIWPCESSRSHTTI
AKYAQYQASSFQESLQHHIIKFGTNIDLSDAKRWKPQLQELLKLPAFMRV
TSTILGMNTVQLYMKVPGSRTPGHQENNNFCSVNINIGPGDCEWFAVHEH
YWETISAFCDRHGVDYLTGSWWPILDDLYASNIPVYRFVQRPGDLVWINA
GTVHWVQATGWCNNIAWNVGPLTAYQYQLALERYEW
Ligand information
Ligand ID
8XQ
InChI
InChI=1S/C10H7NO3/c12-8-4-3-7(10(13)14)6-2-1-5-11-9(6)8/h1-5,12H,(H,13,14)
InChIKey
JGRPKOGHYBAVMW-UHFFFAOYSA-N
SMILES
Software
SMILES
ACDLabs 12.01
O=C(O)c1ccc(O)c2ncccc12
CACTVS 3.370
OC(=O)c1ccc(O)c2ncccc12
OpenEye OEToolkits 1.7.0
c1cc2c(ccc(c2nc1)O)C(=O)O
Formula
C10 H7 N O3
Name
8-hydroxyquinoline-5-carboxylic acid
ChEMBL
CHEMBL1230640
DrugBank
ZINC
ZINC000005933707
PDB chain
2xxz Chain B Residue 3001 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
2xxz
Crystal Structure of the Human Jmjd3 Jumonji Domain
Resolution
1.8 Å
Binding residue
(original residue number in PDB)
Y1376 K1378 T1384 H1387 N1397 W1407 H1467
Binding residue
(residue number reindexed from 1)
Y163 K165 T171 H174 N184 W194 H254
Annotation score
1
Binding affinity
BindingDB: IC50=100nM
Enzymatic activity
Enzyme Commision number
1.14.11.68
: [histone H3]-trimethyl-L-lysine(27) demethylase.
External links
PDB
RCSB:2xxz
,
PDBe:2xxz
,
PDBj:2xxz
PDBsum
2xxz
PubMed
UniProt
O15054
|KDM6B_HUMAN Lysine-specific demethylase 6B (Gene Name=KDM6B)
[
Back to BioLiP
]