Structure of PDB 2wd6 Chain B Binding Site BS01

Receptor Information
>2wd6 Chain B (length=293) Species: 1302 (Streptococcus gordonii) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
AYTAALAEAESKKKQDGYLSEPRSQSLNFKSEPNAIRTIDSSVHQYGQQE
LDALVKSWGISPTNPDRKKSRAYSYFNAINSNNTYAKLVLEKDKPVDVTY
TGLKNSSFNGKKISKVVYTYTLKETGFNDGTKMTMFASSDPTVTAWYNDY
FTSTNINVKVKFYDEEGQLMNLTGGLVNFSSLNRGNGSGAIDKDAIESVR
NFNGRYIPISGSSIKIHENNSAYADSSNAEKSLGARWNTSEWDTTSSPNN
WYGAIVGEITQSEISFNMASSKSGNIWFAFNSNINAIGVPTKP
Ligand information
Ligand IDCA
InChIInChI=1S/Ca/q+2
InChIKeyBHPQYMZQTOCNFJ-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Ca++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Ca+2]
FormulaCa
NameCALCIUM ION
ChEMBL
DrugBankDB14577
ZINC
PDB chain2wd6 Chain B Residue 1763 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB2wd6 Crystal Structure of the Variable Domain of the Streptococcus Gordonii Surface Protein Sspb.
Resolution2.3 Å
Binding residue
(original residue number in PDB)		S648 N650 E664
Binding residue
(residue number reindexed from 1)		S181 N183 E197
Annotation score4
Enzymatic activity
Enzyme Commision number ?
External links
PDB RCSB:2wd6, PDBe:2wd6, PDBj:2wd6
PDBsum2wd6
PubMed19609934
UniProtP16952|SSPB_STRGN Agglutinin receptor (Gene Name=sspB)

[Back to BioLiP]