Structure of PDB 2w7p Chain B Binding Site BS01
Receptor Information
>2w7p Chain B (length=430) Species:
9606
(Homo sapiens) [
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KEKINKIIMEATKGSRFYGNELKKEKQVNQRIENMMQQKAQITSQQLRKA
QLQVDRFAMELEQSRNLSNTIVHIDMDAFYAAVEMRDNPELKDKPIAVGS
MSMLSTSNYHARRFGVRAAMPGFIAKRLCPQLIIVPPNFDKYRAVSKEVK
EILADYDPNFMAMSLDEAYLNITKHLEERQNWPEDKRRYFINSVVFGTSA
QEVVKEIRFRIEQKTTLTASAGIAPNTMLAKVCSDKNKPNGQYQILPNRQ
AVMDFIKDLPIRKVSGIGKVTEKMLKALGIITCTELYQQRALLSLLFSET
SWHYFLHISLGLGSTHLTRDGERKSMSVERTFSEINKAEEQYSLCQELCS
ELAQDLQKERLKGRTVTIKLKNVNFEVKTRASTVSSVVSTAEEIFAIAKE
LLKTEIDADFPHPLRLRLMGVRISSFPNEE
Ligand information
>2w7p Chain E (length=11) [
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gggaaggattc
Receptor-Ligand Complex Structure
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PDB
2w7p
Structural and Functional Elucidation of the Mechanism Promoting Error-Prone Synthesis by Human DNA Polymerase Kappa Opposite the 7,8-Dihydro-8-Oxo-2'-Deoxyguanosine Adduct.
Resolution
3.71 Å
Binding residue
(original residue number in PDB)
S196 D198 E199 K321 S355 I357 G358 V360 T361 K468 T469 R470 A471 E520
Binding residue
(residue number reindexed from 1)
S164 D166 E167 K231 S265 I267 G268 V270 T271 K378 T379 R380 A381 E430
Enzymatic activity
Enzyme Commision number
2.7.7.7
: DNA-directed DNA polymerase.
Gene Ontology
Molecular Function
GO:0003684
damaged DNA binding
GO:0003887
DNA-directed DNA polymerase activity
Biological Process
GO:0006281
DNA repair
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:2w7p
,
PDBe:2w7p
,
PDBj:2w7p
PDBsum
2w7p
PubMed
19542228
UniProt
Q9UBT6
|POLK_HUMAN DNA polymerase kappa (Gene Name=POLK)
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