Structure of PDB 2v87 Chain B Binding Site BS01

Receptor Information
>2v87 Chain B (length=79) Species: 10090 (Mus musculus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
GSPEFGYWITCCPTCDVDINTWVPFYSTELNKPAMIYCSHGDGHWVHAQC
MDLEERTLIHLSEGSNKYYCNEHVQIARA
Ligand information
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB2v87 The Plant Homeodomain Finger of Rag2 Recognizes Histone H3 Methylated at Both Lysine-4 and Arginine-2.
Resolution1.8 Å
Binding residue
(original residue number in PDB)
G414 Y415 S435 T436 A442 M443 I444 Y445 W453 S470 N474
Binding residue
(residue number reindexed from 1)
G6 Y7 S27 T28 A34 M35 I36 Y37 W45 S62 N66
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Biological Process
GO:0006310 DNA recombination
Cellular Component
GO:0005634 nucleus

View graph for
Molecular Function

View graph for
Biological Process

View graph for
Cellular Component
External links
PDB RCSB:2v87, PDBe:2v87, PDBj:2v87
PDBsum2v87
PubMed18025461
UniProtP21784|RAG2_MOUSE V(D)J recombination-activating protein 2 (Gene Name=Rag2)

[Back to BioLiP]