Structure of PDB 2rdv Chain B Binding Site BS01

Receptor Information
>2rdv Chain B (length=52) Species: 883 (Nitratidesulfovibrio vulgaris str. 'Miyazaki F') [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MKKYVCTVCGYEYDPAEGDPDNGVKPGTAFEDVPADWVCPICGAPKSEFE
PA
Ligand information
Ligand IDFE
InChIInChI=1S/Fe/q+3
InChIKeyVTLYFUHAOXGGBS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
CACTVS 3.341
OpenEye OEToolkits 1.5.0		[Fe+3]
FormulaFe
NameFE (III) ION
ChEMBL
DrugBankDB13949
ZINC
PDB chain2rdv Chain B Residue 53 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB2rdv Structure determination of rubredoxin from Desulfovibrio vulgaris Miyazaki F in two crystal forms.
Resolution1.9 Å
Binding residue
(original residue number in PDB)		C6 C9 C39 C42
Binding residue
(residue number reindexed from 1)		C6 C9 C39 C42
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0005506 iron ion binding
GO:0009055 electron transfer activity
GO:0046872 metal ion binding
Biological Process
GO:0043448 alkane catabolic process
Cellular Component
GO:0005737 cytoplasm

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:2rdv, PDBe:2rdv, PDBj:2rdv
PDBsum2rdv
PubMed10089348
UniProtP15412|RUBR_NITV9 Rubredoxin (Gene Name=rub)

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